Alteromonas mediterranea MED64: I533_10410
Help
Entry
I533_10410 CDS
T02958
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
amag
Alteromonas mediterranea MED64
Brite
KEGG Orthology (KO) [BR:
amag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amag03032
]
I533_10410
03036 Chromosome and associated proteins [BR:
amag03036
]
I533_10410
03400 DNA repair and recombination proteins [BR:
amag03400
]
I533_10410
DNA replication proteins [BR:
amag03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
I533_10410
Chromosome and associated proteins [BR:
amag03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
I533_10410
DNA repair and recombination proteins [BR:
amag03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
I533_10410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-DNA_bdg
HU-CCDC81_euk_2
Phage_holin_3_6
Motif
Other DBs
NCBI-ProteinID:
AGP82052
LinkDB
All DBs
Position
complement(2336789..2337076)
Genome browser
AA seq
95 aa
AA seq
DB search
MTKSELIERLADQARHIPAKELELAIKELLEQMAQTLQKGERIEIRGFGSFSLHYRAPRV
GRNPKTGETVKLDGKYVPHFKPGKELRERVDASIA
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagtctgaattaattgaacggctcgcggatcaagcgcgtcatattccggcgaaa
gaactcgaactggcaattaaagaacttctagaacaaatggcgcaaacacttcaaaagggt
gagcgtattgaaattagaggttttggtagcttttcgcttcactaccgcgcacctcgcgta
ggtagaaaccctaaaacgggtgaaaccgtaaagttagatggtaagtatgtaccgcacttt
aagcctggtaaggaacttcgcgaaagggtagacgcctcaatcgcataa
DBGET
integrated database retrieval system
