Alteromonas mediterranea MED64: I533_16190
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Entry
I533_16190 CDS
T02958
Name
(GenBank) LacI family transcriptional regulator
KO
K06145
LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
Organism
amag
Alteromonas mediterranea MED64
Brite
KEGG Orthology (KO) [BR:
amag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amag03000
]
I533_16190
Transcription factors [BR:
amag03000
]
Prokaryotic type
Helix-turn-helix
LacI family
I533_16190
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GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_Tnp_ISL3
Sigma54_DBD
HTH_23
HTH_IclR
HTH_10
HTH_3
HTH_Crp_2
NAD_binding_11
HTH_38
HTH_36
Motif
Other DBs
NCBI-ProteinID:
AGP83189
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Position
3678597..3679604
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AA seq
335 aa
AA seq
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MSKVKKSRTKISDVANHLGVHKTTVSRALNNSSGISKSLALKIKKAARELNYIPNRAAQS
LCADNNRTIALLLPSFGNNVFNDVMLGVKAVADKANYALMIGDSTYTELGEERTVESYIQ
QNVSGFILTSTRHTEETRKMLLATGTPVAEIMDISSEPFDINYGVNNELAAQSMTQHLID
KGRRNIAFCSLFLDWRAILRKQGWETALDNAGLSAERYVSSRADASFQAGAELLSETLHK
WPDTDALFFVSDELAAGAVMECNRRGIKPGKDIDICGFNDLSFARSIYPALTTVSVPRRK
MAEMATESLIALIEGEDVEPASQVLPFELKIRETA
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaggtaaaaaagtctcgcaccaaaatatcagatgtagccaatcatttaggggtt
cacaaaactactgtatctcgggcactaaataattctagcggcatttctaaatcgttagcc
ctcaaaattaaaaaggcagcgcgagagctaaattatatccctaaccgggccgcccaatcg
ctatgtgcagacaacaatagaaccattgcattattactcccatccttcggaaacaatgtg
tttaacgatgtaatgttaggtgtgaaggccgttgccgataaggcaaattatgcactgatg
attggcgactcgacctataccgagcttggcgaggagcgtactgtcgaatcttacattcaa
cagaacgtgagtggcttcattcttacttcgacgcgccatactgaagaaacgagaaaaatg
ctgctagccacagggacgcctgtggccgaaattatggatatttctagtgagccctttgat
attaactatggggtaaataacgaattagcagcccaatctatgacccaacatctcatcgac
aaagggcgccgtaatattgccttttgctctttgtttttagattggcgcgcaatattgaga
aaacaaggctgggaaaccgcgctggacaatgcagggctatcagcagagcgatatgtctcc
tctagagccgacgcttcatttcaagctggtgctgagcttctctcagaaacactgcataag
tggcccgatacagacgcgctattttttgtaagtgacgaacttgcggccggcgcagtgatg
gaatgtaataggcgaggtattaagcctggcaaagatatcgatatctgcggttttaacgac
ctgagttttgcgcgttcaatttacccagctctaacaacggtttcagtcccgcgccgaaag
atggctgaaatggcaaccgagtcattgatagcgctaatagaaggcgaagacgttgaacca
gcgagccaagttttaccttttgagcttaaaatacgagaaactgcttag
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