Alteromonas mediterranea MED64: I533_16340
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Entry
I533_16340 CDS
T02958
Name
(GenBank) DNA polymerase
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
amag
Alteromonas mediterranea MED64
Pathway
amag03030
DNA replication
amag03430
Mismatch repair
amag03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
I533_16340
03430 Mismatch repair
I533_16340
03440 Homologous recombination
I533_16340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amag03032
]
I533_16340
03400 DNA repair and recombination proteins [BR:
amag03400
]
I533_16340
Enzymes [BR:
amag01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
I533_16340
DNA replication proteins [BR:
amag03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
I533_16340
DNA repair and recombination proteins [BR:
amag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
I533_16340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DEDDh_C
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AGP83219
LinkDB
All DBs
Position
complement(3711243..3711923)
Genome browser
AA seq
226 aa
AA seq
DB search
MIKQFIQACASVFFDKNRFKAKLRERYVGKTSFAAIDLELTSLQPSKTQITSLGYVEGKG
MRISLASSGYHVINTRADLGQSPVIHGLTQDILERGEELDEALRHLLPLLKRNILIFHNA
KLDLMALDRAFKQNNLQTVEVIYIDTLQLALYQLNKQHQVLPNNSATLTVCRQRLDLPAF
PAHNALDDALATLQLFFAQLNELGVTGEDSLKALLHTKAVGQYQLG
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgataaagcagtttatacaagcgtgcgcctcagtgtttttcgataaaaacaggtttaaa
gcaaagcttcgagaacgctatgtaggtaagacttcatttgccgctatcgatttagaactt
acctccctgcagccgtctaaaacacaaataacctcattgggttatgtggaaggtaagggg
atgcgaatttctcttgcatcaagcggatatcatgtaattaatacacgtgccgacttaggg
caaagcccggtcattcatggtttaacgcaagacatattagagagaggagaggagcttgac
gaagcactgcgtcacttactgccactactaaagcgtaatattctgatatttcataacgct
aaacttgacctaatggcacttgaccgggcgttcaagcagaataatttacaaacagtagag
gtgatttacattgataccctacaactggcgctatatcagttaaacaaacaacatcaggtt
cttcctaataatagcgctacgcttacggtgtgtcggcagcgcttagacttacccgccttt
cccgcccacaatgcattagacgatgcgttagccacgttacagttattttttgcccaacta
aacgaattaggggttaccggcgaagactcattaaaggcattgcttcataccaaggctgtg
ggtcaatatcaattaggctga
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