Alteromonas mediterranea MED64: I533_17155
Help
Entry
I533_17155 CDS
T02958
Name
(GenBank) primosome assembly protein PriA
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
amag
Alteromonas mediterranea MED64
Pathway
amag03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
I533_17155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amag03400
]
I533_17155
Enzymes [BR:
amag01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
I533_17155
DNA repair and recombination proteins [BR:
amag03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
I533_17155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
Helicase_C
ResIII
Zn_ribbon_PriA
AAA_30
WHD_PriA
AAA_19
nSTAND_NTPase5
Zot
ABATE
Motif
Other DBs
NCBI-ProteinID:
AGP83382
LinkDB
All DBs
Position
complement(3919233..3921422)
Genome browser
AA seq
729 aa
AA seq
DB search
MAFIQVAVPVPLRQLFTYTHDSALEAGVRVMVPFGPRKLVGVVVETLRKSESEIDNSNKL
KAIEMVLDHQPIVDGVLLKMAQWLWQYYHHAPGEVLHAMLPVLLRKGESAGPTPQDILML
TDEGKKTLSASLSRAPKQKACFTALTKRAMLAIEARKQFGAPAVKALVEKSLAVIKEVTP
EFKPGAWLSTLTMEDKPVPDTEQSVAIAALNRQHGNFAVSLLEGVTGSGKTEVYLQAIEP
LLREGKQVLILVPEIGLTPQTVSRFEKRFGIAVGVLHSQLSDKDRLQVWQRAKAGELGIV
IGTRSAIFTPLNNPGMLIVDEEHDESFKQQDGLRYHARDLAAMRAKQHNIPLLLGSATPA
LETLNNALSGRYAHLQLTKRAGGARSTHQHVLDARDQPIHYGISQGLLTIMRQHISAGNQ
VLVFVNRRGYAPALLCHHCGETVTCKRCERPYTVHKAQNRLQCHHCGGMRAMPTNCEACH
HNELVTAGTGTEQVEQGLASLFPGVTQVRIDSDTVRGKDKLHQTLDAINRQEYQLLVGTQ
ILSKGHHFPHVTLVAVLDCDGALFSADFRAPEKLAQLVTQLAGRAGRASKPGEMWLQTHN
PHHPLLQDLVHNGYGHFARHALMERKAASLPPFISQFVIRAEATDSSLAYRFLQDCKQVF
TLAHAIEISGPFPCLIEKRQGRFRFMLVCSHQKRAPLHNALRLALPFLQALPQATKVRWS
IDIDPTDFS
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atggccttcattcaagttgctgtaccagtgccgctgcgccaacttttcacatatacccac
gatagcgcactagaagcaggcgtacgggtaatggtgcctttcggtccgcgcaaacttgtg
ggcgtagttgttgaaacactacgaaaatcagagagcgaaattgacaatagcaacaagcta
aaagccattgaaatggtgctagatcatcaacctattgttgatggggtgctgctaaaaatg
gcgcaatggctgtggcagtactaccaccatgctccgggtgaagtgttacacgccatgctg
cctgtattattgcgaaaaggcgagtcggcaggccctactccacaagatatactcatgctt
accgatgagggtaaaaaaacgctgtcagcgtcgctatctcgcgccccaaagcaaaaagcg
tgttttaccgccttgaccaaacgggcgatgctcgcgatagaggcgcgtaagcagtttggt
gcgccagcggtaaaagccttggtagaaaagtcgcttgccgttatcaaagaggttactcct
gaatttaagccgggcgcttggctatctacgttaacaatggaagataagcctgttcccgat
actgagcagtcagttgccatcgccgcccttaaccgtcaacacggcaactttgcggttagc
ttacttgaaggggtgaccggtagcggcaaaacagaagtataccttcaagcgatagagcct
ttactgcgcgaaggaaagcaggtgcttatccttgtgcctgaaattgggcttaccccgcaa
actgtatcccgcttcgaaaagcgctttggcattgccgtgggcgtattgcattcgcaactt
tcagacaaagaccggctgcaagtatggcagcgagcaaaagcgggcgagctcggtattgtt
ataggtacccgctcagctattttcaccccgcttaataacccgggtatgcttattgttgat
gaagagcacgacgagtcgtttaagcagcaggatgggcttcgctatcatgctcgcgatttg
gcggccatgcgtgcgaaacagcataatattcctttactgcttggcagtgccacccctgct
cttgaaacccttaataatgcgctaagcggccgctatgcgcatttacagctcaccaagcga
gccgggggcgcgcgaagtacccatcagcacgtattagatgcgcgcgaccagccaattcac
tacggtatttcacaaggcctgttaaccataatgcgccagcatattagcgcagggaatcag
gtgttggtgtttgtaaatcgccgaggctatgcgccagcgttactttgtcatcattgcggc
gagacagtaacgtgtaagcgttgcgagcgaccttacaccgtacacaaagcgcaaaaccga
ttgcagtgtcaccattgcggcggcatgcgtgctatgccaacaaactgtgaagcttgccat
cacaacgagctagttactgcgggtaccggaacagagcaagtagagcaggggcttgctagc
ttgtttcccggggtaacgcaggtgcgaatagacagcgatacggtgcgcggtaaagataag
ttacatcaaacgctcgatgcaattaaccgccaggaatatcagctgctggtgggcactcag
attttgtctaaaggccaccactttcctcacgtcacattagtggctgttctcgattgcgat
ggcgcactgtttagcgcagacttcagagcccctgaaaagcttgctcaactggtaactcaa
cttgctggaagagcggggcgtgcaagtaaacccggtgaaatgtggctgcaaacccataat
cctcatcacccgctgctacaagatttggtgcataatggttacgggcactttgccaggcat
gcgttaatggagcgaaaagcggcaagcttgcccccgtttattagtcagttcgtaatacgc
gccgaagctactgatagcagtttggcttatcgatttttacaagactgtaagcaggtattt
acgctagcgcacgccattgagataagcggcccgttcccatgcctaattgaaaagcgccaa
ggccgatttcgattcatgctggtgtgtagtcatcaaaaacgcgccccgcttcataatgcg
ctgcgtttggcgcttccgtttttacaggctttaccgcaggccactaaggtaaggtggtca
atcgatatcgatcctaccgatttcagttag
DBGET
integrated database retrieval system
