KEGG   Aquitalea magnusonii: DLM_1578
Entry
DLM_1578          CDS       T05698                                 
Name
(GenBank) ClpB protein
  KO
K11907  type VI secretion system protein VasG
Organism
amah  Aquitalea magnusonii
Pathway
amah03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:amah00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    DLM_1578
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:amah02044]
    DLM_1578
Secretion system [BR:amah02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   DLM_1578
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA AAA_5 Clp_N AAA_22 ClpB_D2-small AAA_16 nSTAND3 Zeta_toxin AAA_7 AAA_25 TniB AAA_18 NBD_SMAX1 Sigma54_activat AAA_14 IstB_IS21 AAA_29 NTPase_1 nSTAND6 ResIII T2SSE SLFN-g3_helicase SRP54 Hpr_kinase_C
Other DBs
NCBI-ProteinID: BBF85197
UniProt: A0A3G9GHR8
LinkDB
Position
complement(1643697..1646345)
AA seq 882 aa
MSVSLKSLIERLTPAARQALEQAASRALGRTHFEVEIEHVLLALLDQQDNAALAALLALG
LPLDKLGRELDAAQDSFRSGNTRNPVLSAWLPRWLEKAWLLASMEHGESDISTLDLLLTL
WQDDALRNAVQGSSRTLAAQDSSLLHGAYRELRRHGGEGSASPASQPAEAAEQADDTSAS
QEKPQRTRGNPALDKYTVDLTAQARAGKIDPILGRDSEIRQMIDILMRRRQNNPILTGEP
GVGKTAVVEGLARQIVLGEVPDTLLGVTLRTLDLGLLQAGASVKGEFENRLRQVIDEVKA
SPVPIILFIDEAHTLIGAGGAAGQNDAANLLKPALARGELRTIAATTWAEYKKYFEKDAA
LARRFQVVKVEEPAPDMAVQMVRGLTAAMRQHHQVDILDEAIRAAVHLSSRYITGRQLPD
KAISVLDTACARVALSRAGKPAPLQDIQVLIDNAEREIDALSREEGHAERIAELTARLDT
LRLDRDALHAAWQQQQQLVDEIEQLKQQAAEARPKGRKVSPLQQKRLELRQLQKNQPLAF
ECVDESVIADVIAGWTGIPLGRMVSNELEQVQKLGALLAERVIGQDHALAQIAERVQIAK
ANLEDPGKPKGVFLLVGPSGVGKTETALALAEALYGGERNLITINMSEYQEAHSVSGLKG
SPPGYVGYGEGGVLTEAVRRRPYSVVLLDEVEKAHPDVMELFFQVFDKGVLEDSEGREVD
FKNTIILLTSNAGTDLLMRACEHGVTVEGETRDPTPADLVEILRPTLQQAFKPALLGRLD
IVPYFPISDDVLHAIVALKLERIRNRIAANHGAKVEFPTSLAATLAARCMDVDSGARNAD
AILTRTLLAPISCDLLGRMASGKPVKKIAVSLKGEDIKVRLS
NT seq 2649 nt   +upstreamnt  +downstreamnt
atgtcggtatctctcaaatcgctgatcgaacgtcttacccccgccgcacgccaggcgctg
gaacaagcagccagccgggcgctggggcgtacccactttgaagtggaaatcgaacatgtg
ctgctggccctgctggatcagcaagacaatgccgccctggccgccttgctggcgctgggc
ctgcccctggacaagctgggccgcgaactggatgcagcccaggacagctttcgcagcggc
aacacccgtaatccggtactgtccgcctggctgccacgctggctggaaaaagcctggctg
ctcgccagcatggaacatggcgaaagcgatatctccacactggatctgctactgacgctg
tggcaggacgatgcgctgcgcaatgcggtgcaaggcagttcccgcacgctggccgcacag
gacagcagcctgctgcacggtgcctatcgcgaactgcgccgccatggcggtgaaggcagc
gccagcccggccagccagccagcagaagctgccgaacaggccgacgacaccagcgccagc
caggaaaaaccgcaacggacacgcggcaatccggcactggacaaatacacggtggacctc
accgcccaggcgcgcgccggcaagatcgaccccatcctgggccgtgacagtgaaatccgc
cagatgatagacatcctgatgcgccgccgtcagaacaaccccattctgaccggggaaccg
ggtgtgggaaaaaccgccgtggtggaaggactggcgcggcagatcgtgctgggtgaagtg
ccggacaccctgctgggcgtgaccctgcgtacgctggacctgggcttgctgcaagccggt
gccagtgtgaagggcgagtttgaaaaccgcttgcgccaggtaatcgacgaggtcaaggcc
agcccggtacccatcattctgttcatcgacgaagcacacaccctgatcggggctggcggt
gcggcaggacagaacgacgcagccaatctgctgaaaccggcactggcgcgcggcgagctg
cgcaccatcgcggccaccacctgggccgaatacaaaaaatacttcgaaaaagatgccgcg
ctggcccgccgcttccaggtagtcaaagtggaagaaccggcaccggacatggcggtacaa
atggtgcgcggcctcaccgccgccatgcgccagcaccatcaggtggacattctggacgaa
gccatccgtgccgccgtacacctgtccagccgctacattaccggccgccagttgccggac
aaggccatcagcgtgctggacaccgcctgcgcccgggtggcgctgtcgcgtgccggcaaa
cccgcgccgctgcaggacatccaggtgctgatcgacaacgccgaacgggaaatcgacgca
ctgtcgcgtgaggaaggccacgccgagcggattgccgaactcaccgcccggctggacacg
ctgcgtcttgatcgggacgccctgcacgctgcctggcaacagcagcagcaactggtggat
gaaatcgaacagttgaaacagcaggccgcagaagcgcgccccaagggcaggaaagtcagc
cccttgcaacaaaagcggctggaattgcgccaactgcaaaaaaaccagccactggccttc
gagtgcgtggatgaaagcgtgattgccgatgtgatagccggctggaccggcattccgctg
ggccgcatggtcagcaacgagctggaacaagtacaaaagctgggcgcgctgctggccgaa
cgcgtaatcggccaggaccacgcgctggcgcagattgccgaacgggtacagattgccaag
gccaatctggaagaccccggcaaacccaagggcgtgttcctgctggtagggccgtccggc
gtgggcaagaccgaaaccgcgctggcactggccgaagccctgtacggcggtgagcgcaat
ctgatcaccatcaatatgtccgaataccaggaagcccacagcgtatccggcctgaagggc
tcaccacccggctatgtcggctatggcgaaggcggtgtgctgaccgaagcggtgcgtcgt
cgcccgtattcggttgtgctgctggatgaagtggaaaaagcccatccggacgtgatggag
ctgtttttccaggtattcgacaagggcgtgctggaagacagtgaaggccgcgaagtggac
ttcaagaacaccatcatcctgctcacctccaacgcaggcaccgacctgctgatgcgcgcc
tgcgaacacggcgtgacggtggaaggcgaaacccgcgaccccaccccggccgacctggtg
gaaatcctgcgccccacgctgcaacaggctttcaagccggcattgctgggccggctggac
atcgtgccctacttccccatcagcgacgatgtattgcacgccattgtggccctcaagctg
gagcgcatccgcaaccgcatcgccgccaaccacggcgccaaggtggagtttcccaccagc
ctggccgccacgctggccgcccgctgcatggatgtggacagcggtgcgcgcaatgccgac
gccattctcacccgcaccttgctggcaccgatttcctgcgatctgctcggccgcatggcc
agcggcaagccggtaaagaaaatcgctgtctcgctcaagggtgaggatatcaaggtcagg
ctgagctaa

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