Aquitalea magnusonii: DLM_1745
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Entry
DLM_1745 CDS
T05698
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
amah
Aquitalea magnusonii
Brite
KEGG Orthology (KO) [BR:
amah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amah03400
]
DLM_1745
DNA repair and recombination proteins [BR:
amah03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DLM_1745
Archaeal homologous recombinant proteins
DLM_1745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_15
ABC_tran
AAA_21
APG6_N
nSTAND3
cobW
RsgA_GTPase
ABC_ATPase
AAA_18
NTPase_1
AAA_22
DUF87
Motif
Other DBs
NCBI-ProteinID:
BBF85361
UniProt:
A0A3G9GGI7
LinkDB
All DBs
Position
1826221..1829649
Genome browser
AA seq
1142 aa
AA seq
DB search
MKIRSLRLKNLNSLKGEWTIDFTQPPFRDNGLFAITGPTGAGKSTLLDAICLALYHETPR
LKNISANSNDIMTRHTADCLAEVEFEVKGKIYRAFWSQRRARDKADGALQQARVELADGD
GNILTTHSNDKLKRIAAITGLDFARFTKSMLLAQGGFAAFLNASPNERAELLEELTGTEL
YGQISQRVFEQARDSRQALQQLQAQAGGVELLAETQRSAMQQQLSSLQQQQQMLAEQQQQ
LGQALQWRQQLAQAQQQQQAASLQLEQAQAAITQAAPQLQQLAASAPAQRIAPLYQQWQS
QQQRLTAGQAALQALHARYQHSWQQWQQLNWQGFVLARQQSALLASAQAQAQQQWQQWQA
QQQAQPHLARLGESLPLWRSQFDQHARMLQDSAQAEQEARQLATALAAEQQRMQAQALLC
QQAEADFRHAQQAEQAAALLSQQQDLASLRQQWQSAQQAAQQWQQAILLAGQLRQDWQTA
QDLQQALTRLQTLLPQHTAALATLRSQYRELQEQLADKQRLLELELRIQDLEAQRALLQP
GQPCPLCGSASHPLVQHYQAVDATAARQAVLDKQQALDAVQAQGLQANAALAALQQQLDS
LQQQWQAQQASQQQQWQQWQPLAAALAVQPEAWQQPELLNQAAQAAMQQQEQLQQQLLQA
EDAARHWQQCLQSSQQAQQQWQAAQAALALQQQAVASLQQQWAQAGQQQARLTAQAQAQW
QLLQQSLAQAGHAMPADPPRWLADCARQWQDWQQQQQAMQRLEQQLARLEVQARQAAAQC
DEWQHYWQQLALPEPSAAANTAMAELADITTQLEACQQQRTALAAALAQLQGQQQQVAED
VRQQERQLAEVAQQWQLALQHSPFADEAAFTAACLPESQRTALQTMQQGLDRALQQAEAL
LQAANSRLSALQALAVSPLSLEALQAEQAALDGQRQQLSAESGALQALLDNDAQRRAGLQ
ALLAQIDRQQADCECWQRLDGLIGSAKGDKFRRFAQGLTLDHLVYLANRQLARLQGRYQL
RRKAEGELELEIVDSWQADVCRDTRTLSGGESFLVSLALALALSDLVSHKTSIDSLFLDE
GFGTLDAETLEIALDALDSLNASGKMIGVISHVEGMKERIAVQICVTRAGGVGLSALSVV
GG
NT seq
3429 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatccgtagcctgcggctgaaaaacctcaactcgctcaagggcgagtggaccatc
gactttacccagccaccgtttcgcgacaatggcctgtttgccattaccggccccaccgga
gccggcaaatccacgctgctcgatgccatctgcctggcgctctaccacgaaaccccacgg
ctgaaaaacatctctgccaacagcaacgacatcatgacccgccacaccgccgactgcctg
gccgaggtggagttcgaggtaaagggcaagatttaccgggcgttctggagccagcgccgg
gcgcgggacaaggccgacggtgccttgcagcaggcacgggtggagttggccgatggcgac
ggaaacattctcactacccacagcaacgacaagctcaagcgcattgccgccatcaccggg
ctggactttgcccgcttcaccaaatccatgctgctggcccagggcggttttgccgctttt
ctgaatgccagccccaatgagcgcgccgagttgctggaagaactgaccggcaccgaactg
tacggccagatttcccagcgcgtgttcgaacaagcgcgtgacagccgccaggcgctgcaa
caattgcaggcacaggccggcggggtggagctgctggccgaaacgcagcgcagcgccatg
cagcagcaactgagcagcctgcagcagcaacagcagatgctggccgagcagcagcaacag
cttggccaggccctgcaatggcgacagcaactggcacaggctcagcagcaacagcaggca
gccagcctgcaactggaacaggcccaagccgccatcacccaggcggccccgcaattacag
caactggcagccagcgcaccggcccagcgcattgcgccgctatatcaacaatggcaaagc
cagcagcaacgcctgactgcgggccaggccgctttgcaagcgctgcatgcgcgctaccag
cacagttggcagcaatggcagcaactaaactggcaaggctttgtgctggcgcggcagcaa
tctgccctgctggcctccgcgcaggcacaggcgcagcagcaatggcagcagtggcaagca
cagcaacaggcccagccacacttggcgcgactgggcgagtctttgccgctctggcgcagc
cagtttgaccagcatgcccgcatgctgcaggacagcgcacaggcagagcaagaagcccgc
caactggccaccgcactggcggctgagcagcagcgcatgcaggcgcaagccctgctctgt
cagcaggccgaggccgatttccgccacgcgcaacaagccgaacaggccgccgcattgctt
agccagcagcaggaccttgccagcctgcgccagcagtggcagtccgcccagcaagccgcc
cagcagtggcagcaagccatcttgctggccgggcagttgcggcaagactggcagaccgcg
caagacctgcagcaggcgctgacccgactgcagacactgctgccgcagcacacggccgcg
ctggccaccctgcgcagccagtatcgagaactgcaggaacaactggccgacaagcagcgc
ctgctggaactggaactgcgcatccaggatctggaagcccagcgcgcgctattgcaaccg
ggccagccttgccccttgtgtggctcggccagccaccccttggtgcagcactaccaggcg
gtggatgccaccgccgcacgccaggcggtgcttgacaagcagcaagccctggatgcggtg
caggcgcagggcctgcaagccaatgccgcactggcagcgctgcaacagcagttggacagc
ctgcagcagcaatggcaagcacaacaggccagccagcaacagcaatggcagcaatggcag
ccgctggccgctgcgctggcagtgcaaccggaagcatggcagcagccggaattactcaac
caggccgcacaggcggccatgcagcagcaagagcaattacagcagcaactgctgcaggcc
gaggacgccgcccgccactggcagcagtgcttgcagagcagtcagcaagcgcagcagcag
tggcaggccgcgcaagctgcgctggccctgcagcagcaggccgtggccagcttgcaacag
caatgggcgcaggccgggcaacaacaggcacggcttacggcacaagcgcaggcgcagtgg
cagttgctgcagcagtcgctggcccaggcgggccatgccatgccggcagatccgccacgc
tggctggccgactgcgcccggcaatggcaagactggcaacagcaacagcaagcgatgcag
cggctggagcagcaactggcgcggctggaggtgcaagccaggcaggcggcggcccagtgc
gatgaatggcagcactactggcaacaactggccctgccagagccgtcggcagcagcgaac
accgcaatggcggagctggccgacatcacgacgcagctggaagcctgccagcagcagcgg
acagccttggcggccgcgctggcgcagttgcaagggcagcaacagcaagtagcggaggat
gtccgccagcaagagcggcaactggcggaggtcgcgcagcaatggcagctcgccttgcag
cacagtccatttgccgatgaagccgcctttaccgctgcctgcctgccggagagccagcgt
accgcgctgcaaaccatgcagcagggcttggacagggccttgcagcaggcggaagccttg
ctgcaggctgccaacagccggctgagcgcactgcaagcccttgccgtcagtccgctcagc
ctggaagcgctgcaggcagagcaggccgcgctggatgggcagcgtcagcaactgagcgcc
gaaagcggcgcgctgcaggccttgctggataatgatgcccagcgccgtgccggcctgcag
gccttgctggcgcagattgaccgccagcaggcggattgcgaatgctggcagcggctggat
gggctgatcggctcagccaagggcgacaagttccgccgctttgcccagggattgacgctg
gatcatctggtctatctggccaatcgtcagttggcgcgcctgcaggggcgttaccaatta
cggcgcaaggccgagggtgagctggagctggaaattgtcgatagctggcaggcggatgtc
tgtcgtgatacccgcaccctgtcgggcggtgagagttttctggtcagcctggcactggcc
ttggcgctgtcagacctggtcagccacaaaacctccatcgactcgctattcctggatgag
ggctttggcacgctggatgccgaaaccctggagattgcactggatgcgctggacagcctg
aatgccagcggcaagatgataggcgttatcagccatgtggaaggcatgaaggagcgcatt
gcggtgcagatctgcgtgacgcgcgccggtggcgtgggcctgtcggcgctgtcggtggtg
ggcggctga
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