Aquitalea magnusonii: DLM_2567
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Entry
DLM_2567 CDS
T05698
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
amah
Aquitalea magnusonii
Pathway
amah03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
amah00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DLM_2567
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amah03019
]
DLM_2567
03016 Transfer RNA biogenesis [BR:
amah03016
]
DLM_2567
Enzymes [BR:
amah01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
DLM_2567
Messenger RNA biogenesis [BR:
amah03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
DLM_2567
Transfer RNA biogenesis [BR:
amah03016
]
Prokaryotic type
tRNA degradation factors
DLM_2567
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
OB_RRP5_4th
KH_2
S1_RRP5
KH_KhpA-B
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
BBF86173
UniProt:
A0A3G9GH55
LinkDB
All DBs
Position
complement(2720984..2723131)
Genome browser
AA seq
715 aa
AA seq
DB search
MFNKITKSFQYGNQTVTLETGEVARQASGSVIVSVDETVVLVTVVGGKNVKPGQDFFPLT
VDYLERTYAAGKIPGGFFKREGKQSEKEVLTSRLIDRPIRPLFPEGFYHDVQIVATVLSL
NPEVDSDIPAMIGASAALAISGLPFAGPIGAARVGYANGEYILNPTKTELATSEMDLVVA
GTERAVLMVESEAKELSEAVMLGAVVFGHDQMQAAIKAINELADEVNPVMFDWTAPAKNE
ELIAKVRGIAGAKLADAFRLRQKQARTVAINDAWSDVKAALITEETDTLLANEIKGIFKG
LEAEIVRGQILAGEPRIDGRDTRTVRPISIRSNVLPRTHGSALFTRGETQGLVVTTLGTK
QDEQIIDALAGEYTERFMLHYNFPPYSTGEAGRMGPPKRREIGHGRLAKRALVAVLPPES
EFGYSMRVVSEITESNGSSSMASVCGGCLSLLSAGVPLKAHVAGIAMGLILEGNRFAVLT
DILGDEDHLGDMDFKVAGTAEGITALQMDIKIQGITKEIMQVALAQAKEGRQHILGLMKE
AVEGPQELSAHAPRLYVMKINPEKIRDVIGKGGETIRSITKDTGTEINIEEDGTITIASI
SGEGAEAAKKRIEEITVEVEVGKIYEGTVVKILDNNVGAIVSILPGKDGLVHISQIANER
IKNVSDYLKEGQVVKVKAIEMDDRGRIRLSIKALLEDESKVARETADSFGLKTQQ
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
gtgttcaataaaattaccaaatcctttcagtatggtaaccagaccgttaccctggaaacc
ggcgaagtagcacgccaggcttccggctccgttattgtatctgttgatgaaaccgtggtc
ctggtgaccgttgttggcggcaaaaacgtcaagccgggtcaggacttcttcccgctgacc
gtagactacctggagcgtacctacgctgccggtaaaattccgggtggcttcttcaagcgt
gaaggcaagcagtccgagaaggaagtgctgaccagccgcctgatcgaccgtccgatccgc
ccgctgttcccggaaggcttctaccacgacgtacagatcgtggccaccgtgctgtcgctg
aatccggaagtggattccgacatcccggccatgattggtgcctccgctgcactggccatc
tccggcctgccgtttgccggcccgatcggtgctgcccgtgtgggttacgccaatggcgaa
tacatcctgaacccgaccaagaccgaactggccacttccgaaatggatctggtggttgcc
ggtaccgagcgggccgtgctgatggtcgagtccgaagccaaggaactgtccgaagccgtg
atgctgggcgccgtggtatttggtcacgaccagatgcaagccgccatcaaggccatcaac
gaactggctgatgaagtgaacccggtgatgttcgactggaccgctccggccaagaacgaa
gagctgatcgccaaggtacgcggcattgccggtgccaagctggctgatgctttccgtctg
cgtcagaagcaagcccgtaccgtagccatcaacgacgcctggagcgacgtcaaggctgcg
ctgatcaccgaagaaaccgacaccctgctggccaacgaaatcaagggcatcttcaagggt
ctggaagccgaaatcgtgcgtggccagattctggctggtgaaccgcgtatcgacggtcgc
gacacccgcaccgtgcgcccgatcagcatccgcagcaacgtgctgccgcgcacccacggt
tccgccctgtttacccgtggcgaaacccagggcctggtggtaaccaccctcggcaccaag
caggacgagcagatcatcgacgcgctggccggtgaatacaccgagcgcttcatgctgcat
tacaacttcccgccgtactccaccggtgaagccggccgcatgggcccgccgaagcgtcgt
gaaatcggccacggtcgtctggccaagcgtgccctggttgccgtactgccgccggaatcc
gaattcggttactccatgcgcgtggtttcggaaatcaccgagtccaacggttcttcctcc
atggcttcggtttgcggtggctgcctgtcgctgctgtccgccggtgtgccgctgaaggcc
cacgttgccggtatcgccatgggtctgatcctggaaggcaaccgctttgccgtgctgacc
gacatcctgggtgatgaagatcacctgggcgacatggacttcaaggtagccggtactgcc
gaaggcatcaccgccctgcagatggacatcaagatccagggcatcaccaaggaaatcatg
caggttgccctggcacaagccaaggaaggccgtcagcatatcctgggcctgatgaaggaa
gccgtggaaggcccgcaagagctgtccgcccacgctccgcgtctgtacgtgatgaagatc
aacccggagaaaatccgtgacgtgatcggcaagggcggcgaaaccatccgctccatcacc
aaggataccggcaccgagatcaatatcgaggaagatggcaccatcaccatcgcctccatc
tccggtgaaggcgccgaggctgccaagaagcgtattgaagaaatcaccgttgaagttgaa
gtgggcaagatctacgaaggtaccgtagtgaagatcctcgacaacaacgtcggtgccatc
gtttccatcctgccgggcaaggatggtctggtacacatttcccagatcgccaacgagcgt
atcaagaatgtgtccgactacctgaaagaaggccaggttgtgaaggtcaaggccatcgaa
atggatgatcgcggtcgcatccgcctgtccatcaaggcgctgctggaagacgaatccaag
gttgcgcgcgaaaccgccgactccttcggtctgaagacccagcagtaa
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