Aquitalea magnusonii: DLM_3415
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Entry
DLM_3415 CDS
T05698
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
amah
Aquitalea magnusonii
Pathway
amah03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
amah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DLM_3415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amah03400
]
DLM_3415
Enzymes [BR:
amah01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
DLM_3415
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
DLM_3415
DNA repair and recombination proteins [BR:
amah03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DLM_3415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
DUF1631
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
BBF87004
UniProt:
A0A3G9GI11
LinkDB
All DBs
Position
3628786..3629601
Genome browser
AA seq
271 aa
AA seq
DB search
MPELPEVETTRRGVAPYLDCATLQGAIVREGRLRWPVPPQLDATLAGLTVRAVTRRAKYL
LVHFDSGTLLIHLGMSGSLRYVPADTPPQKHDHIDLKLGSHVLRYRDPRRFGAMLWHVGP
VEFHSLLKDLGPEPLSDAFDGEVLHAAIAKRGTAIKLAIMDNHVVVGVGNIYANESLFHA
GINPSRAARDLSLADCKRLASEIKRVLSLAIEAGGSTLRDFVNTEGKSGYFQQDYYVYDR
QEQACRICSSPIRQIRQGQRSSYYCPLCQPC
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaactgcccgaagtggaaacaacccggcgcggtgttgcgccttatctggattgt
gccaccctgcaaggtgccatcgtgcgcgaaggccgcctgcgctggccggtgccgccacaa
ctggatgccacccttgccggactgacagtacgcgcagtcacgcgccgtgccaagtacctg
ctggttcattttgatagcggaaccctgctaatccacctgggcatgtccggcagcttgcgt
tatgtccctgccgatacgccaccacaaaaacatgatcacatcgacctgaaactgggcagc
catgtgctgcgctaccgcgacccgcgtcgcttcggtgccatgctatggcatgtggggcca
gtggaattccactcgctgctgaaagacctggggcccgagcccttgtcggacgcctttgac
ggtgaagtcctgcatgcggccattgccaaacgcggcacagccatcaaactggccatcatg
gacaatcacgttgtggtgggcgttggcaacatctacgccaatgaatcgctgtttcatgca
ggcatcaaccccagccgtgccgcgcgtgatctgagcctggctgactgcaaacggctggcc
agcgaaatcaaacgggtactgagcctggcgatcgaggctggcggcagcacactgcgcgac
ttcgtcaacaccgagggcaagtccggctacttccagcaggactactatgtctacgaccgg
caggagcaagcctgtcgtatctgcagcagcccgatacgacagatacggcagggacagcga
agttcctactattgcccgctatgccagccatgctag
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