Aquitalea magnusonii: DLM_3425
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Entry
DLM_3425 CDS
T05698
Name
(GenBank) exodeoxyribonuclease V alpha chain
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
amah
Aquitalea magnusonii
Pathway
amah03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DLM_3425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amah03400
]
DLM_3425
Enzymes [BR:
amah01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
DLM_3425
DNA repair and recombination proteins [BR:
amah03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DLM_3425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
Viral_helicase1
UvrD_C_2
AAA_11
SH3_13
AAA_22
Helicase_RecD
UvrD-helicase
SLFN-g3_helicase
T2SSE
nSTAND3
AAA_28
UvrD_C
PhoH
AAA_24
DEAD
CbiA
Mg_chelatase
MeaB
AAA_5
NPHP3_N
Rad17
AAA
DUF218
Motif
Other DBs
NCBI-ProteinID:
BBF87013
UniProt:
A0A3G9GJH3
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Position
complement(3641452..3643167)
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AA seq
571 aa
AA seq
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MNSLATESLLPAQLAQLFLRLDPALDDSTLALLSELTAANQSGHVCLPIGHRPERRRLQA
SPLLGEPGSYAPLILDEAGRLYFAHLWFDEQNLARQLSQLASASLPQDADKVGQVLAVLF
PASQGQAPDRQKQAAALAARQRLLVVSGGPGTGKTTTVVRLLAMLAMLAERPLVMAMAAP
TGKAAARMSESVRNARDTLPVADAIRQQLPQQAQTLHRLLGLRPGMEQARYHAGHPLPLD
VLVVDEASMIDLAMMARLVAALPSQARLILLGDRDQLASVDAGAVLGDLCSQVTYLPATR
AWLAQAGAGALPPDEGQVAALADSVVLLTHSHRFRADSGIGALAALVNRGAALPALQLLQ
DGQHADIAQLPALDDQALWQQHQPYLDAVAADRPLEEIQAAFSRFMLLAAERSQVAQVNL
RMESLLEQQGRKQAGRDWYAGRPVMITANDYGVGLFNGDIGFAVERTQGLRVAFPAADGS
WREFAPGRLPEHETVFAMTVHKSQGSEFDTVWLQLPASPGPVLNRALVYTAITRARRCFA
VAGSAAVWTHAVQLAPVRHSGLADLLSTIQR
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgaacagcctggccaccgaatcactgctgcccgcccaactggcgcagctattcctgcgg
ctggaccctgctttggacgacagcacattggcgctgctaagcgagctgaccgcagccaac
cagtccggtcatgtctgtctgcccatcggtcatcgtccggagcgccgccgcttgcaggcc
tctcccttgctgggcgaaccgggcagttatgccccgctgattctggatgaagctggccgc
ctgtactttgcccatctctggtttgacgaacagaatctggcccggcaactgagccaactg
gcctctgccagcttgccacaggatgcggacaaggtggggcaggtgctggcagtcttgttc
cccgccagtcagggacaagcaccagaccggcaaaaacaggcggcggcactggcggcgcgg
caacggctgctggtggtatccggcggccccggcaccggcaagaccaccaccgtggtgcgc
ttgctggccatgctggccatgctggccgagcgcccgctggtgatggccatggccgcgccc
accggcaaggcggctgcgcgcatgagcgagtcggtgcgcaatgcccgtgacaccctgccg
gtggccgatgccattcgccagcagctaccgcaacaggcacaaaccctgcatcgcctgctg
ggcctgcggcccggcatggagcaggcccgctaccatgccggccaccctctgccgctggat
gtgctggtggtggacgaagcgtcgatgatagacctggccatgatggcacgcctggtggcc
gccctgccgtcccaggccaggctgatcctgctgggagatcgcgaccagctcgcttcggtg
gatgccggtgcggttctcggcgatttgtgcagccaggtgacttatctgccggcaacgcgg
gcctggcttgcgcaggccggggccggtgcgttgccaccggacgaaggccaggtggcagcg
ctggccgacagcgtggtgctgctgacgcacagtcatcgcttccgtgccgactccggcatc
ggcgcgctggccgcactggtcaaccgcggggcagccctgcctgccctgcaattgctgcag
gacggccagcatgccgatattgcgcagttgcctgcgctggatgaccaggcgctatggcag
cagcatcaaccttatctggatgccgtcgccgcggaccgtccgctggaggaaatccaggct
gcgttttcccgcttcatgttgctggcggccgagcgcagccaggtggcgcaggtgaacctg
cgcatggaaagcctgctggagcagcaagggcgcaagcaggccgggcgcgactggtatgcc
ggcaggccggtgatgattaccgccaatgattacggtgtcggcctgttcaacggcgatatc
gggtttgccgtggaacgcacccagggcctgcgggtggcattcccggccgcagacggtagc
tggcgcgagtttgctcccggtcgtctgcccgagcatgaaaccgtgtttgccatgaccgta
cacaagagtcagggctcggaattcgacaccgtctggctgcagttgccagccagccccggc
ccggtgctcaaccgggcactggtgtataccgccattacccgtgcccgtcgctgctttgcc
gtggccggcagcgccgccgtctggacccatgccgtccagttggcaccggtacgccattct
ggcctggcggatttgttgagcacgattcagcggtga
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