Aquitalea magnusonii: DLM_3429
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Entry
DLM_3429 CDS
T05698
Name
(GenBank) exodeoxyribonuclease V gamma chain
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
amah
Aquitalea magnusonii
Pathway
amah03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DLM_3429
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amah03400
]
DLM_3429
Enzymes [BR:
amah01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
DLM_3429
DNA repair and recombination proteins [BR:
amah03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DLM_3429
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
DUF7161
Motif
Other DBs
NCBI-ProteinID:
BBF87017
UniProt:
A0A3G9GPN7
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All DBs
Position
complement(3649035..3652229)
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AA seq
1064 aa
AA seq
DB search
MLFLYQSNRLEQLGQLYAAMLQAQPLSDPFAAETVIVQSRGMGRWMTLDLAQQCGIAANI
DYVLPAAFAWRLMQKVMPGLPRKSSFSPEVLSWRLMELLPTLQGEVFAPLQRYAAGGEAA
AFELAGKVADIFDQYLVFRPDWIRAWEAGERLELGEDEAWQAALWQQLAAQDPGRHRVRM
LDEFFAELRTEHLPERITLFGIASLAPMYLALIKRLAELTDVCLFTLNPCAAYWGDIVDT
RRKLKLREKGDLFATEGHPLLASLGKQGRDFFELIAADAELDARPLFAEPAGDSLLARLQ
RDILQLQMPGEDGQRLAPDDCSVELHATHGPMRELEVLKDRLLAMLADDPTLSSADIAVL
TPDINSYAPYIDAVFGKRDDAPSLPYAIADRQVEREEPLLAAIGTLLQLLDSRFAADQVL
ALLDSPALLQRFGLQAQDLPFIQDWVRQSGIRWGRDAAHKAALGLPADPLYTWRWGLDRL
LLGSILPPAMAGDDSGLFAGLLPQGGAGGQLGEVLARFASCYAVLDALATGWAIPTDAAG
WAARLLEGIDQLFAVDDEAELALDVVRDALQELVDDAAMAGFTQPFSLQVLRDWLQRKLT
MASPLGFLSGGITFCAMVPMRSIPFKVLCLIGMNDGAYPRDERPVSFDLVARHPRRGDRS
RRFDDRYLFLEAILSARQRLYLSYVGLSARNNEPLPPSALIAELLDCFQAMCGETAAAQL
LVRHPLQPFSPRCYDGRDARLASFDPAFAAALAAPPAQPQPFATLLPPPQSSSVVHVNDF
IRFWKNPPRAWLAERLAIRLHGQEEELPVREPFSVERDASRIMRTQLVTRILAGKPLAPL
KQRLLAAGLLPAAELGQAWLGSETASSARLAHRLPAVLTTATLPPMPVNLCLHGTTLAGE
LSGLRPEGQIRLVIGKMNAAERLEWWLSHLLLCAMRPAGIACQSLLYDDSGHYRLDDEPE
AIGLLEAWVVRWQQGQQQPLPFFGRTSWAYAEQLYKQEDAPALALEKALDKWDPSFVGEF
AAPQCEEPVNRLVFRHLDPLADPLFAQLAQTLLLPLVARLEGQA
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
atgctttttctctatcagtccaatcgtctggagcaattgggccagctatatgccgccatg
ctgcaggcgcagccgctgtccgacccttttgccgccgaaacggtcatcgtgcagagccgg
ggcatggggcgctggatgacgctggatctggcacagcaatgcggtatcgctgccaatatc
gactatgtgttgcccgctgcctttgcctggcggctgatgcagaaggtgatgcctgggctg
ccgcgcaaatcgtcattcagcccggaagtgctgagctggcgcctgatggaactgctgccc
accctgcaaggcgaggtgtttgcccccttgcagcgctatgccgccggtggcgaggccgca
gccttcgaactggccggcaaggtggcggatatcttcgaccagtacctggtgttccgcccg
gactggattcgcgcctgggaggcgggagaacggctggaactgggtgaggacgaagcctgg
caggccgcgttgtggcagcaactggccgcgcaggaccctggccgccaccgtgtgcgcatg
ctggacgagttctttgccgagctgcgcacagagcacctgccggagcgcatcaccctgttc
ggcattgccagcctggcaccgatgtatctggcgctgatcaagcggctggccgaactcacc
gatgtctgcctgttcaccctcaacccctgcgcagcttactggggcgatatcgtcgacacc
cggcgcaagctcaagctgcgggaaaagggcgatctgttcgccaccgaaggccacccgctg
ctggcctcgctaggcaagcaggggcgcgactttttcgagctgattgctgccgatgccgag
ctggacgcccggcccctgtttgccgaaccggccggtgacagcctgctggcgcgcttgcag
cgcgacatcctgcaattgcagatgccgggcgaggatggccagaggctggcaccagatgat
tgttcggtggaactgcatgccacccacggcccgatgcgcgagctggaggtgctcaaagac
cggctgctggccatgctggccgacgatcccacgcttagcagcgccgacatcgcggtattg
acgccggacatcaacagttacgccccttatatcgatgccgtgttcggcaagcgcgacgac
gcgcccagcctgccctatgccatcgccgaccggcaggtggagcgggaagagcccttgctg
gccgccatcggtacgctgttgcaattgctggattcgcgctttgccgccgaccaggtgctg
gccttgctggatagtccggccctgttgcaacgctttggcctgcaggcgcaagacctgccc
ttcattcaggactgggtaaggcagagcggcatccgctggggacgcgatgctgcacacaag
gccgcgctggggctgccggcagacccgctatacacctggcgctggggtctggaccggctg
ttgttgggcagcatcctgcctccggcgatggccggggacgatagcggcctgtttgccggc
ttgctgccgcagggcggggccggcggacaactgggcgaggtgctggcgcgctttgccagt
tgctatgcggtgctggacgcactggccactggctgggccatccccaccgatgccgctggc
tgggcggcacgcttgctggagggcatcgaccagctatttgcggtggatgacgaggcggaa
ctggcgctggatgtggtgcgcgacgccctgcaggagctggtggacgatgccgccatggcc
ggtttcacccagcccttcagcctgcaggtactgcgcgactggctgcagcgcaagctcacc
atggcctcgccgctgggctttttgtccggtggcatcaccttctgcgccatggtgccgatg
cgttccatccccttcaaggtgctgtgcctgatcggcatgaatgacggtgcctatccgcgt
gacgaacgcccggtcagcttcgacctggtggcgcgccatccgcgccggggcgaccgctcg
cgccgctttgacgaccgctacctgttcctggaagccatcctgtcggcgcgtcagcgcttg
tacctgtcctatgtcggcctgtccgcccgcaataacgagccactgccgccatcggcactg
attgccgaattgctggattgcttccaggccatgtgcggcgaaaccgccgcggcacaactg
ctggtacgtcatcccttgcaaccgttctcgccacgttgttatgacggcagggatgcacgc
ctggccagctttgatccggcatttgccgcggcactggcggcgccaccggcccagccgcag
ccatttgccaccctcctgccgcccccgcagagcagcagtgtggtgcatgtgaatgacttc
atccgcttctggaagaatccgccacgcgcctggctggccgagcgtctggccatccgcctg
cacggccaggaggaggagttgccggtgcgcgaacccttcagcgtggagcgcgacgccagc
cgcatcatgcgcacccaactggtaacacgcatattggcgggcaagccgctggccccgctc
aagcagcggctgctggcggccggcttgttgccagcggccgaactgggacaggcctggctg
ggcagcgaaaccgccagctcggccagactggcacaccgcctgccggcggtactcaccacc
gccacgctgccgcccatgccggtcaacctctgcttgcacggcaccacgctggccggtgag
ttgagcggattgcgcccggaggggcagatccggctggtaatcggcaaaatgaatgccgcc
gagcggctggagtggtggctgagccatttgttgctgtgtgccatgcgaccggccggcatt
gcctgccagtcgctgctgtacgacgacagcggccactaccggctggatgacgagccagag
gccatcggcttgctggaggcctgggtggtgcgctggcagcagggccagcagcagcccttg
ccattttttggccgcaccagttgggcttatgccgaacagttgtacaagcaggaggatgcc
cccgcactggcgctggaaaaggcactggacaagtgggatcccagctttgtcggtgaattt
gccgcaccgcagtgtgaagaaccggtcaaccggctggtgttccgacatctcgacccgctg
gccgatccgctgttcgcccagttggcacaaaccctgttgctgccgctggtggccaggctg
gaggggcaggcatga
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