KEGG   Aquitalea magnusonii: DLM_3604
Entry
DLM_3604          CDS       T05698                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
amah  Aquitalea magnusonii
Pathway
amah03030  DNA replication
amah03410  Base excision repair
amah03420  Nucleotide excision repair
amah03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:amah00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    DLM_3604
   03410 Base excision repair
    DLM_3604
   03420 Nucleotide excision repair
    DLM_3604
   03440 Homologous recombination
    DLM_3604
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:amah03032]
    DLM_3604
   03400 DNA repair and recombination proteins [BR:amah03400]
    DLM_3604
Enzymes [BR:amah01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     DLM_3604
DNA replication proteins [BR:amah03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     DLM_3604
DNA repair and recombination proteins [BR:amah03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     DLM_3604
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     DLM_3604
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc DNA_polI_exo1
Other DBs
NCBI-ProteinID: BBF87190
UniProt: A0A3G9GH44
LinkDB
Position
complement(3851546..3854326)
AA seq 926 aa
MIDGSSYLYRAFHAMPDLRSPDGRPTGAVYGMVNMLRRLEKEVQFDYSACVFDAKGKTFR
DELYPEYKANRPSMPEELAAQIKPVHEVVQASGWPMLMVDGVEADDVIGTLARMGEAAGF
KVIISTGDKDMAQLVTPMVSLVNTMTNENLDQAGVKEKFGVPPERIIDYLTLIGDKVDNV
PGVDKCGPKTAVKWLEEYGTLDNIIANADKVGGKVGENLRAALDWLPRGHQLITIKCDVD
LQQDMPYGLNSLQHGVKDRPRLAELFKDHGFRTFYREVTEGEDAPVSSPAPVDAPAASLG
QTDDMFAMADAVSAPAPVAPSVSAISRHYHTILDEAALQGWLDKLNSGALVSLDTETTSL
DQMQARLVGISFALQAGEAAYLPLGHHYAGAPQQLALDEVLARLKPWLEDASKPKCGQNL
KYDRHVFANHGISLAGVVDDTMLASYVLESHQRHNMDDLAARHLGETTVSYEDICGKGAK
QIGFGEVDIEIAANYAAEDADITLRLNQHFAPQLTGRLGEIYRDIELPVAEVLFRMERNG
VLIDREQLAAQSHQLGTQMLQLESQAYELAGQPFNLNSPKQLQEILFGKLGIPTKGIKKT
PSGGFSTDESVLEALALDYPLPKCILQYRSLTKLKSTYTDKLPTLINPDTGRVHTNYSQA
VAITGRLASSDPNLQNIPVRTAEGRRVREAFIAKPGHSIVSADYSQIELRIMAHLSDDAG
MLAAFASGEDIHKATAAEVFGVTLEQVTSDQRRAAKAINFGLIYGMSAFGLAAQLDIERS
AAQQYIDRYFMRYPGVADYMQRTRETAREQGYVETVFGRRLYLPEIKLANPARRAGAERA
AINAPMQGTAADLIKLAMIAVQHWLDAQKLSSLLIMQVHDELVLEVPDSELELVKQQLPQ
IMAGVAQLKVPLLAEVGAGSSWEAAH
NT seq 2781 nt   +upstreamnt  +downstreamnt
ttgatcgacggctcttcctacctgtatcgcgccttccacgcgatgcccgatttgcgttct
ccggatggccggcccaccggggcggtatacggcatggtcaacatgctgcgccggctggag
aaagaggtgcagttcgattatagcgcctgcgttttcgacgccaaaggcaagactttccgc
gatgagttgtacccggaatacaaggccaaccggccttccatgccggaagagctagccgca
cagattaagccggtacacgaggtggtgcaagcttcgggctggccgatgctgatggtggac
ggggtggaagcggacgatgtcatcggcacgctggcacgcatgggcgaggcggccggcttc
aaggtgatcatctccaccggcgacaaggacatggcccaactggtgacgcccatggtgtcg
ctggtgaacaccatgaccaatgaaaacctggaccaggccggggtgaaagagaagttcggc
gtgccgccggaacgcatcatcgactacctcaccctgataggcgacaaggtggacaacgtc
cccggcgtggacaagtgcggccccaaaaccgccgtcaagtggctggaagaatacggcacg
ctggacaatatcatcgccaatgccgacaaggtgggtggcaaggtgggcgaaaacctgcgc
gccgcgctggactggctgccgcgcggtcatcagctgatcaccatcaagtgtgatgtcgat
ttgcagcaggacatgccctacggcctcaacagcctgcagcacggcgtgaaagaccgtccg
cgcctagccgagctgttcaaggaccacggcttccgcaccttctaccgcgaagtgaccgaa
ggcgaagatgcgccggtcagcagcccggccccggttgatgcgcctgccgccagccttggc
cagactgatgatatgttcgccatggccgatgcagtatccgctccagcaccagtcgccccg
tcagtgagcgccatcagccgccattaccacaccattctggatgaggccgcactgcaaggc
tggctggacaagctaaatagcggtgcgctggtgtcgctggacactgaaaccaccagcctg
gaccagatgcaggcccggctggtgggcatcagctttgccctgcaagccggcgaagccgcc
tacctgccgctgggtcaccactatgccggtgcgccgcagcaactggcgctggatgaggtc
ctggcccggctcaagccctggctggaagacgccagcaagcccaaatgcggtcagaacctg
aaatacgaccgccatgtgtttgccaaccacggcattagcctggccggtgtggtggatgac
accatgctggcctcctatgtgctggaaagccaccagcgccacaatatggacgacctggcc
gcacgccacctgggtgaaaccacggtcagctatgaagacatctgcggcaagggagcgaag
cagatcggctttggcgaggtggatatcgagattgccgccaattacgcggcggaagatgcc
gacatcacgctgcggctgaaccagcactttgccccgcagctgaccggccgcctgggcgaa
atctaccgcgacatcgaactgccggtggccgaagtgctgttccgcatggagcgcaacggc
gtgctgatcgaccgcgaacaactggcggcgcagagccatcagttgggcacgcagatgctg
caactggaaagccaggcctatgaactggccggtcagccgttcaatctgaattcgcccaaa
cagttgcaggaaatcctgttcggcaagctgggcattcccaccaagggcatcaagaaaacg
ccgtctggtggtttctctaccgacgagtcggtactggaagcgctggcgctggattacccg
ctgcccaaatgcatcctgcaataccgcagcctgaccaagctcaagtccacctataccgac
aagctgcccacgctgatcaacccggacaccggccgggtgcataccaattactcacaggca
gtagccattaccgggcgcttggccagttccgacccgaacctgcaaaacatcccggtacgc
accgccgaaggccgccgcgtgcgcgaggccttcatcgccaagccgggccacagcattgtc
agtgccgactattcgcagatcgaactgcgcatcatggcgcatctgtccgacgacgcaggc
atgctggccgcctttgccagtggcgaggacattcacaaggccaccgctgccgaggtgttc
ggcgtgacgctggaacaggtgacgagcgatcagcgccgcgccgccaaggccatcaacttc
ggcctgatctacggcatgagcgcctttggcctggctgcccagctcgacatcgaacgcagc
gccgcccagcaatacatcgaccgctacttcatgcgctaccccggcgtggccgactacatg
cagcgcacccgcgaaaccgcgcgcgagcaaggctatgtggaaaccgtattcggccgccgc
ctgtatctgccggaaatcaagctggccaacccggcccgccgcgccggggccgaacgtgcc
gccatcaatgcaccgatgcaaggcaccgccgccgacctgatcaagctggcgatgattgcc
gtgcagcactggctggacgcacaaaagctgtccagcctgctgatcatgcaggtacacgat
gaactggtgctggaagtgccggatagcgagctggaactggtgaaacagcagctgccgcaa
atcatggcaggcgtggcgcaactcaaggtgccgctgctggcggaagtgggtgccggtagc
agttgggaagccgcccactaa

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