Aquitalea magnusonii: DLM_3845
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Entry
DLM_3845 CDS
T05698
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
amah
Aquitalea magnusonii
Pathway
amah03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
amah00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DLM_3845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amah03019
]
DLM_3845
Enzymes [BR:
amah01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
DLM_3845
Messenger RNA biogenesis [BR:
amah03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DLM_3845
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
HI1480
AAA_22
Shikimate_DH
Cas3-like_C_2
GRP
Motif
Other DBs
NCBI-ProteinID:
BBF87424
UniProt:
A0A3G9GJ58
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All DBs
Position
complement(4119653..4121128)
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AA seq
491 aa
AA seq
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MSEITFADLGLAQDLLRAVADTGYTVPTPIQAQAIPQVLKGGDLLAAAQTGTGKTAGFTL
PLLQLLMGKPSRQAGKPRALVLTPTRELAAQVEESVREYGKYLPLKSMVMFGGVGINPQI
AALRKPVDILVATPGRLLDHVSQRTLDLSAVEILVLDEADRMLDMGFIHDIRKVLALLPA
KRQNLLFSATFSDEIKTLADKLLDQPKLVEVARRNTTNELVDQRVHLVDRDKKTDLLIKL
IRDHNWYQVLVFTRTKHGANRLAEKLDKIGIPAAAIHGNKSQNARTRALADFKNSTLQVL
VATDIAARGLDIDQLPHVVNFELPNVPEDYVHRIGRTGRAGSPGEAVSLVCVDEFSFLRD
IEKLTKQSIARFTVPGFEADLNVKPEPIPMGGNSGRGRGQGGGGRQGQGARQGQGAGKPR
HEQQAKPTGHGHRSPAGNTPRSKPAAPRQPAAAQPQGARQPQAAKPASGQQQQRRSQPAR
QVSALLSPAKR
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaaattacctttgctgaccttggcctggcccaggatttgttgcgtgccgtggcc
gataccggttacaccgtccccactcccatccaggcgcaggccattccgcaggtgctcaaa
ggcggcgatttgctggccgccgcgcaaaccggtaccggcaagaccgccggctttactctg
cctttgctgcaattgctgatgggcaaaccgtcgcgtcaggcgggcaaaccgcgcgcgctg
gtgctgacccccacgcgtgaactggccgcccaggtggaggagtcggtccgcgaatacggc
aaatacctgccgctcaaatccatggtgatgtttggcggtgtcggcatcaatccgcagatt
gccgcgctgcgcaagccggtggacattctggtagccacgccgggccgtctgctcgaccat
gtcagccagcgcacgctggatttgtcggcggtggaaatcctggtactggacgaggccgac
cgcatgctggacatgggcttcatccacgatatccgcaaggtactggcgctgctgccggcc
aagcggcagaacctgctgttctccgccactttttccgacgaaatcaagacgctggccgac
aagctgctggatcagcccaagctggtggaagtggcgcgccgcaataccaccaacgagctg
gtggaccagcgcgtgcatctggtagaccgcgacaagaagaccgatctgctgatcaagctg
atccgcgatcacaactggtatcaggtgctggtgttcacccgtaccaagcacggtgccaac
cgtctggcggaaaaactggacaagatcggcattccggcggcggccattcacggcaacaag
agccagaacgcccgtacccgcgcactggccgacttcaagaactccaccctgcaagtgctg
gtggccaccgatatcgccgcccgcggcctggatatcgaccaactgccgcacgtggtcaac
tttgaactgccgaatgtgccggaagactacgtacaccgcatcggccgtaccggccgtgcc
ggcagtcccggcgaagcggtatcgctggtgtgtgtggatgagttcagcttcctgcgcgac
atcgaaaagctgaccaagcaatccattgcccgctttaccgtacccggcttcgaggccgac
ctgaacgtgaagccggaacccatcccgatgggcggcaacagtggccgtggtcgcggccag
ggcggtggtggccgtcaaggccagggcgcgcgccagggccagggtgccggcaaaccgcgt
cacgagcagcaagccaagcccaccggccacggccatcgcagcccggctggcaacacgccg
cgcagcaaaccggcagcaccgcgtcagccggcggccgcccagccgcagggcgcacgtcag
ccacaagccgccaagcctgccagcggccagcaacagcagcgtcgcagccagccggcacgc
caggtgtcggcattgttgtctcccgccaagcgctga
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