Aquitalea magnusonii: DLM_4355
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Entry
DLM_4355 CDS
T05698
Name
(GenBank) Holliday junction DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
amah
Aquitalea magnusonii
Pathway
amah03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DLM_4355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amah03400
]
DLM_4355
Enzymes [BR:
amah01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DLM_4355
DNA repair and recombination proteins [BR:
amah03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DLM_4355
RecFOR pathway proteins
DLM_4355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
Mg_chelatase
AAA_16
AAA_22
AAA_3
nSTAND3
Rad17
AAA_18
DUF815
AAA_14
AAA_2
TsaE
NTPase_1
AAA_17
RNA_helicase
AAA_33
GGDEF_2
Bac_DnaA
AAA_25
AAA_28
AAA_24
NB-ARC
TniB
ABC_tran
IstB_IS21
NACHT
Motif
Other DBs
NCBI-ProteinID:
BBF87920
UniProt:
A0A3G9GJ56
LinkDB
All DBs
Position
4645040..4646074
Genome browser
AA seq
344 aa
AA seq
DB search
MIETDKLIGGAPERRIVTQQSLSTQEEALERALRPKLLDEYVGQKKAREQLEIFIEAAKR
RGEALDHVLLFGPPGLGKTTLAHIVAREMGVNLRQTSGPVLERAGDLAALLTNLEPHDVL
FIDEIHRLSPVVEEILYPALEDYQIDIMIGEGPAARSVKLDLPPFTLIGATTRAGMLTNP
LRDRFGIVARLEFYTAEELTRIVSRSAGLLNVTLADDGAFEVARRSRGTPRIANRLLRRV
RDYAEVKSDGIVTAQVADAALAMLDVDPAGLDVMDRKLLAAILEKFGGGPVGLDNVGAAI
GESTDTIEDVIEPFLIQQGYLQRTPRGRMATALAYTHFGLPLKD
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgattgaaaccgacaagctgattggcggcgcgcccgagcgacgcattgtgacccagcaa
agcctgtccacccaggaggaggcgctggaacgcgccctgcgtcccaagctgctggatgaa
tatgtgggccagaagaaggcgcgcgaacagctggaaatcttcatcgaggcggccaagcgt
cgcggcgaagcgctggaccacgtgttgctgttcggcccgcctggccttggcaagaccacg
ctggcgcatatcgtggcgcgcgagatgggcgtgaacctgcgccagacctccggcccggtg
ctcgagcgtgccggcgacctggcggcactgctgaccaatctggagccgcacgatgtgctg
ttcatcgacgaaatccaccgcttgagcccggttgtcgaggaaatcctctacccggcgctg
gaggattaccagatcgacatcatgatcggcgaaggcccggccgcgcgctcggtcaagctg
gacctgccgcccttcaccctgattggtgccactacccgcgccggcatgctcaccaacccc
ttgcgtgaccgcttcggcattgtggcgcggctggagttttataccgcggaagagctgacc
cgcattgtcagccgttctgccggcctgcttaacgtgacgctggccgatgatggcgctttt
gaagtggcccgccgttcgcgtggcacgccacggattgccaaccgcctgttgcgccgggta
cgtgattacgccgaggtgaagtccgacggcattgtcaccgcccaggttgccgatgccgcg
ctggccatgctggatgtggacccggccgggctggatgtgatggaccgcaaattgcttgcc
gccattctggaaaaattcggtggtggcccggtggggctggataatgtgggggcggccatc
ggtgaatccaccgataccatcgaagatgtgatcgaacccttcctgatccagcaaggctat
ctgcagcgcacgccgcgtggacggatggcaacggcactggcctacacccacttcggcctg
ccattgaaagactag
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