Aquitalea magnusonii: DLM_4503
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Entry
DLM_4503 CDS
T05698
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
amah
Aquitalea magnusonii
Pathway
amah03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
amah00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DLM_4503
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amah03019
]
DLM_4503
03400 DNA repair and recombination proteins [BR:
amah03400
]
DLM_4503
Enzymes [BR:
amah01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DLM_4503
Messenger RNA biogenesis [BR:
amah03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DLM_4503
DNA repair and recombination proteins [BR:
amah03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DLM_4503
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
RecQ_Zn_bind
Helicase_C
ResIII
T4SS-DNA_transf
Motif
Other DBs
NCBI-ProteinID:
BBF88056
UniProt:
A0A3G9GZC2
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All DBs
Position
4781057..4782850
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AA seq
597 aa
AA seq
DB search
MQDALTLLGNIFGYPAFRGQQAQIVQHIVDGGHALVLMPTGGGKSLCYQIPALMRPGLAI
VVSPLIALMQDQVAALTEVGVAAACLNSATAPDDARDIARRARDGSLKLLYVAPERLLTP
RFLDFLAQLDISLFAIDEAHCVSQWGHDFRPEYQQLGMLADQYPQVPRIALTATADPQTR
EDILHYLKLGDAQVFLSSFDRPNLFYQVVEKHNAKKQLLDFINNEYPGASGIVYCLSRKR
VEETAEWLSQNGIPALPYHAGLSHEVRERHQREFLREEGIVMAATVAFGMGIDKPDVRFV
AHIDLPKSPENFYQESGRAGRDGLPASSWLCYGLNDMVQLNQMIQGSEMAELQKQVELSK
LDAMLAFCETASCRRQQILSHFGEASQPCGHCDNCLNPPITFDATVPVQKLLSCIYRVEQ
RFAANHVVDVLLGRSNQSVLSFGHDKLSTFGIGRDYNQRAWRSLIRQLVARKILQVDIAR
GQSLVLTDACRPLLKGQEKIYLRPLAEDSKARSVNTDRWLRTEREERLWQALRRWRRQTA
DEHNVPAYAVFSDRTLRDIVERRPQSLRELGKVYGLGELKLARYGDALQQILDSQQD
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgcaggacgcactcaccttacttggcaatatctttggctatccggcctttcgtggtcag
caggcgcaaatcgtgcagcacattgtggatggcggtcatgcgttggtgttgatgcccacc
ggtggcggcaagagcctgtgctaccagattcccgcgctgatgcgcccgggactggccatt
gtggtgtcgcccctgatcgccctgatgcaggaccaggttgccgcgctaacagaagttggc
gtggccgccgcctgtctgaactcggccactgcgccggacgatgcccgtgatattgcaagg
cgtgcccgcgatggttccttgaagttgttatatgttgcgccagagcgtttgctgaccccg
cgctttctggattttctggcgcagctggacatttccctgtttgccatcgatgaagcgcat
tgtgtcagccagtgggggcacgacttccgcccggaataccagcagctgggcatgctggcc
gaccaatacccgcaagtgccgcgtattgcgctcaccgcgaccgccgacccgcaaacccgt
gaagacatcctgcattacctcaagctgggggatgcacaggtgttcctgtccagttttgat
cggcccaacctgttttatcaggtggtggaaaagcacaatgccaaaaagcagttgctcgac
ttcatcaataatgaatatccgggtgcttccggcattgtgtactgcctgtcgcgcaagcgg
gtggaagagaccgccgagtggctgagccagaacggcattccggccttgccctaccacgcc
ggcctcagtcatgaagtgcgcgaacggcaccagcgcgaattcctgcgcgaagagggcatt
gtcatggcggccaccgtggctttcggcatgggcatcgacaagccggacgtacgctttgtc
gcccatatcgacctgcccaagagcccggaaaatttttatcaggaatccggccgcgccggg
cgcgatggcctgccggcctccagttggctgtgttacgggctgaacgatatggtgcagctc
aaccagatgattcagggctcggaaatggccgagctgcaaaagcaggtggaactgtccaag
ctggatgccatgctggccttctgcgaaaccgccagttgccgccgccagcaaatcctcagc
cactttggcgaagccagccagccctgcggtcattgcgacaattgcctgaatccccctatc
acttttgatgccaccgtaccggtgcagaagctactgtcctgtatctatagggtggagcag
cgttttgctgccaatcatgtggtggatgtgctgctggggcgcagcaaccagtcggtcctc
agtttcgggcatgacaagctgtccaccttcggcatcgggcgcgactacaaccagcgcgcc
tggcgttcgctcatccgccagttggtggcgcgcaagatcctgcaagtggacatcgcccgc
ggccagtcgctggtgttgaccgatgcctgccgccccttgctcaaggggcaggagaaaatc
tatctgcggccgctggcggaagacagcaaggcgcgcagcgtcaataccgaccgctggttg
cgtaccgaacgcgaggagcgactgtggcaggccttgcgtcgctggcgccgtcagactgcg
gatgaacacaacgtcccggcctatgcggtgttttctgaccgtaccttgcgcgacatcgtc
gagcgtcggccacaaagcctgcgcgagctgggcaaggtatatggcctgggcgaactgaag
ctggcgcgctatggcgatgcattgcaacaaatcctcgatagccagcaggactga
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