Alteromonas mediterranea UM7: I635_02115
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Entry
I635_02115 CDS
T02724
Name
(GenBank) 2',5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
amai
Alteromonas mediterranea UM7
Brite
KEGG Orthology (KO) [BR:
amai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
amai03016
]
I635_02115
Enzymes [BR:
amai01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
I635_02115
Transfer RNA biogenesis [BR:
amai03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
I635_02115
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
AGP95968
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All DBs
Position
complement(465615..466268)
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AA seq
217 aa
AA seq
DB search
MRSFIGLDLSATEKLALDSWRQQALPEIMPRQWVKNESSRSRKSGNKRNNHNSGQGPSLP
YAVPAANFHITLSFLGEINHRQHEALVYELDQLVSEPFSLTLNATGLWNGPKILFAAPTD
TPKALSELAKLSRKAARKAAIEVENREYKPHVTVVRKATSTLPLPLYSPSVDVHVSAFHL
FESVTTPQGVTYPVRQSWPLKHNMSVREKLRRGITDE
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atgcgaagctttattggtttagatcttagcgccacagaaaaacttgctttggatagctgg
cgtcaacaggcattgcctgaaatcatgcctcgccaatgggtaaaaaacgagtcgagcagg
tctcgaaagtctggcaataagcgcaacaatcacaatagtggacaaggaccttcgctacct
tatgccgtgcccgcggcaaactttcacatcacactcagctttttaggcgagataaatcac
cgtcagcacgaagcgctggtgtatgaactcgaccagctcgttagcgaaccattttcatta
accctaaatgcaacagggttgtggaatggccccaaaatcctatttgctgcgcctacggat
acaccaaaggcactaagtgaactcgccaagttatcgcgtaaagctgcccgcaaagcagca
atagaagtagaaaacagagaatataagcctcacgttaccgttgttagaaaggctacatca
actttacctctgccactttacagccccagtgtagacgttcacgtctcggcatttcacctg
tttgagtctgtcactacacctcagggggttacctaccctgttcgccagtcttggccgtta
aaacacaatatgtcggtaagagaaaagctacgtcggggaataaccgacgagtaa
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