Alteromonas mediterranea UM7: I635_06875
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Entry
I635_06875 CDS
T02724
Symbol
aspS
Name
(GenBank) aspartyl-tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
amai
Alteromonas mediterranea UM7
Pathway
amai00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
amai00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
I635_06875 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
amai01007
]
I635_06875 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
amai03016
]
I635_06875 (aspS)
03029 Mitochondrial biogenesis [BR:
amai03029
]
I635_06875 (aspS)
Enzymes [BR:
amai01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
I635_06875 (aspS)
Amino acid related enzymes [BR:
amai01007
]
Aminoacyl-tRNA synthetase
Class II (A)
I635_06875 (aspS)
Transfer RNA biogenesis [BR:
amai03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
I635_06875 (aspS)
Prokaryotic type
Other AARSs
I635_06875 (aspS)
Mitochondrial biogenesis [BR:
amai03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
I635_06875 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
AGP96900
LinkDB
All DBs
Position
1516963..1518723
Genome browser
AA seq
586 aa
AA seq
DB search
MRTDYCGNIDSSYIGQEVTLCGWVNKRRDLGGVIFIDLRDREGIVQVVFDPDLPEVLSVA
NTLRSEFCVKLTGKVRARPEGQINKDMRTGEIEILGTGLEVINKADVLPLDWNQENSEEQ
RLRYRYLDLRRPVMSQRLQFRAKVTGAVRRFLEEEGFLDIETPILTKATPEGARDYLVPS
RTHKGEFFALPQSPQLFKQLLMMSGMDRYYQIVKCFRDEDLRADRQPEFTQIDIETTFLD
ADGVMSITERMIRDLFNKMLDVDLGDFPRMTYAEAMKRFGSDKPDLRNPLELTDVADLLA
NVDFKVFSGPANDPKGRVAAIRVPGGASLSRKQIDEYTKFVGIYGAKGLAWIKVNDATAG
LDGLQSPILKFLTEDITNAIIERSGAQSGDILLFGADNYTVVTEAMGALRLKLGEDFELL
EGEWKPLWVVDFPMFEEFDGQLHAIHHPFTAPRGLTPDELKANPAEALSDAYDMVLNGVE
LGGGSVRIHNEDMQSTVFNILGIDDEEAKNKFGFLLDALRFGAPPHAGLAFGLDRLVMLM
TGATSIRDVMAFPKTTTAACPLTSAPSPANPQQLEELAIATVKKQS
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgcgcacagattactgtgggaatatcgattcatcatacattggacaagaagttaccctt
tgcgggtgggttaacaagcgtcgcgacttaggcggtgtaattttcatcgacttacgtgac
cgtgaaggtatcgtacaagtggtgttcgacccagacctaccagaggtgctatctgttgct
aataccctgcgcagcgagttctgcgttaaacttactggtaaggtgcgtgcgcgtcctgaa
ggacaaatcaataaagatatgcgcacaggtgaaattgagatccttggcactggccttgaa
gtgatcaataaagctgacgtattgccgttagattggaaccaagaaaactcagaagagcag
cgccttcgctatcgttaccttgatcttcgtcgcccggtaatgagccagcgtttgcagttt
cgtgcaaaagtaaccggcgcagtacgtcgtttcctagaagaagaagggtttcttgatatc
gaaacacctattcttactaaggctacaccagaaggtgcccgtgattacctagtaccgagc
cgtacccacaaaggtgaatttttcgctcttccgcaatcgccccagctatttaaacaattg
cttatgatgtcgggtatggaccgctactatcaaatcgttaagtgtttccgagatgaggac
ttgcgtgctgaccgtcagccagagttcacccaaatcgatatcgagaccacgtttttagac
gccgatggcgtaatgtctattacagagcgtatgatccgcgatttattcaacaaaatgcta
gatgttgaccttggcgacttcccgcgcatgacctatgcagaagccatgaagcgctttggt
agcgataagccagacttgcgtaacccgttagagctaacagacgttgcagacctgcttgca
aacgttgactttaaagtattcagtggcccagcaaacgacccgaaaggtcgcgttgcggct
atccgcgtacctggcggcgcctcactatcgcgcaagcaaattgatgagtacaccaagttt
gtaggtatttacggcgcgaaaggcttagcgtggattaaagttaacgacgctacagcaggg
cttgacggtctgcagtcgccaattcttaaattcttaacagaagatattaccaatgcaatt
attgaacgctccggtgctcaaagcggcgatattctattgtttggcgcagataactacacg
gttgttactgaagcgatgggcgcacttcgccttaagctgggtgaagatttcgagcttctt
gaaggcgaatggaagccgctttgggttgttgacttcccaatgttcgaagagtttgacgga
cagcttcacgctattcaccacccgtttaccgcaccgcgcggcctaacgcctgatgagctt
aaagccaacccagctgaagctctatctgacgcctacgacatggtattaaacggtgttgaa
ttaggcggtggttctgtacgtattcacaacgaagatatgcagtctactgtattcaatatc
ttaggcattgacgatgaagaagcgaagaacaagtttggcttcctgcttgacgcactacgc
tttggtgcgccgccacacgctggccttgcatttggtttagaccgtctagtcatgcttatg
acaggcgcaacctctattcgcgacgtaatggcgttcccgaaaacgaccacagcagcttgc
ccattaacgtcggcacctagccctgcaaatcctcagcagcttgaagaacttgctatcgct
acggtgaaaaagcaatcgtaa
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