Alteromonas mediterranea UM7: I635_09275
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Entry
I635_09275 CDS
T02724
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
amai
Alteromonas mediterranea UM7
Brite
KEGG Orthology (KO) [BR:
amai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
amai03016
]
I635_09275
Enzymes [BR:
amai01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
I635_09275
Transfer RNA biogenesis [BR:
amai03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
I635_09275
Prokaryotic type
I635_09275
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
AGP97379
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All DBs
Position
2066194..2067165
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AA seq
323 aa
AA seq
DB search
MARRRKGRDINGIVLLDKPLGGSSNQLLQKVRWLYKAAKAGHTGALDPLASGMLPLCLGE
ATKFSQFLLDAEKTYEVTAQLGVRTTTSDADGEVVEEKPVNVSEEQVRDACLAFLGKSKQ
IPSMFSALKHQGKPLYYYARQGIEIEREPRDIEVFELDVLRIELPYVDMRIKCSKGTYIR
SIVDDLGQNLGCGAYVTRLHRTEVADYPTDKMVSLEKLIEIQESLDDGEFKALDDLLIPM
DTAVSRLPFVTINDAERNRFDNGQSVKGECSEPLSEGTSYRVYHGVDINGIFLGVGEGVL
DPKDQGIPKQEIFVNPKRRVVYS
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atggcaagacgtcgtaaaggccgtgatattaacggcatagtattgcttgataaaccactt
ggtggttcttcgaatcagcttcttcaaaaagtgcgttggctttataaagcagccaaggcg
ggtcacacaggagcgcttgatcctctcgctagtggtatgctgcctttgtgtcttggtgag
gcgactaagttttctcagtttctgctcgatgctgagaaaacgtatgaagttacggcgcag
ctaggggtgcgtacaaccacctctgacgcagacggcgaagttgttgaagaaaagcccgtc
aatgttagcgaagagcaagtccgcgacgcatgccttgcttttttaggtaaaagcaaacaa
atcccgtctatgttttctgcactcaaacatcaaggtaagccgctgtattattatgcccga
caggggattgaaatagagcgagagccccgtgatattgaagtctttgagcttgacgtgtta
cgcattgagcttccttacgtggatatgcgaataaaatgcagcaaaggcacgtatatacgt
tcaatcgttgatgacttagggcaaaacttaggatgcggtgcctacgttacccgtttacat
cgtactgaagtggccgattatcctacggataaaatggtatcgcttgaaaagctaattgaa
atccaggagtcactagacgacggtgagtttaaagcacttgatgacttgctcattcctatg
gacaccgcggtaagtcgtctgccgtttgtgactatcaacgacgctgagagaaatcgcttt
gataatggacaatcggttaaaggagagtgcagcgagccacttagtgagggcacgtcttat
cgtgtttatcacggtgttgatatcaacggcattttccttggcgtaggggaaggggtactt
gacccaaaagatcagggtatacccaagcaagaaatattcgttaacccgaaacgtcgcgtt
gtttatagttag
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