Alteromonas mediterranea UM7: I635_11895
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Entry
I635_11895 CDS
T02724
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
amai
Alteromonas mediterranea UM7
Pathway
amai03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
I635_11895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amai03400
]
I635_11895
Enzymes [BR:
amai01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
I635_11895
DNA repair and recombination proteins [BR:
amai03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
I635_11895
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
AAA_11
NAT10_TcmA_helicase
SLFN-g3_helicase
AAA_22
UvrD-helicase
UvrD_C
SH3_13
DEAD
PhoH
ResIII
RecD_N
nSTAND3
AAA_12
AAA_16
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
AGP97899
LinkDB
All DBs
Position
complement(2650495..2652690)
Genome browser
AA seq
731 aa
AA seq
DB search
MNNNQHSVSSFFDNLFGIEAIDKFVAKEFGFIEQLSQEDAFIWAGILVYLSYMQRNGHSC
IYLKDVAGTTLFEDAVALENNASAPSAKSSASEQHMALTQVMEPKVQQNKGEKAPKTGFE
VPELTPLLKIVKSALGNEQLAKLFVYDNGRLYSRRYYEFEQEVARSVVERAVLHPLHDDV
ADNVKALWPAIFPTTTTDQQDWQQIAVAKSLMQRFCVINGGPGTGKTYTVLRLLLALQAC
DEELKIVLAAPTGKAQQRMTESIMNSVEGLRGKVSDTALDSVPTEAVTLHRLLGLREHGV
ATKYNQHNKLSADVLIVDEASMVDLALMTRIVRALPDHARLYFIGDADQLPAVELGNVLE
QLVSDETALDFSHENPLAGGENSSNERTLGGVPSSMRQHIATLCPHLPLLPVNEQAKSYV
ATLQAPQRFKGQVARVATAIQRGDANGALAAIAQKNSGSKQGDNASQPKSADEKSINTNS
RSRLQPGVHLWPESQLGGRELQQLAKESFLPLFEAQSAEEALNRLNYVRWLTPIRKGAMG
VEGLNNLVFDAIKHKIRRREGHFYQGQPIMIVKNHHPQRLSNGEVGVIWPDSTGKLYAWF
YQDTYVEGQQAGKSLNDSSNNSSAQNLGQQKQALRSISLSRVPQFETVYAMTIHKSQGSE
FNHVVLILPKPESEKAANLFHRGLVYTGLTRAKDGCLIISDSNTFSGMVATVDKRYSGLS
SAISRCAEKVL
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgaataacaatcaacattcagtgtcgtcgtttttcgataacttatttggcattgaagcc
atcgacaaattcgtggcaaaagaatttggctttatagagcaactgtctcaagaggacgcg
tttatatgggcgggaatattggtatacctgtcgtatatgcagcgaaatggacatagctgt
atctatttgaaagacgtggcgggaaccacgctttttgaagacgcggttgccttagaaaat
aatgcgtcagcgccttcagcaaaaagcagtgccagtgagcaacatatggctctcactcaa
gtcatggagcctaaggtacagcaaaataaaggggaaaaagcgcctaaaacaggctttgag
gtaccagagttaacgcctttgcttaaaatagtgaaaagcgcccttggcaacgagcaatta
gccaagcttttcgtatacgacaatggcagactttatagccgccggtactatgaatttgaa
caagaagtggcgagaagcgtagtagaacgcgcagtacttcaccctttacatgatgacgta
gccgacaacgtaaaagccttgtggcctgctatatttcctaccaccactacagatcaacaa
gactggcagcaaatagcggtagccaaaagtttaatgcagcgattttgcgtaataaacggc
gggccgggtacaggtaaaacctacaccgtgctgcgtttattacttgcgctacaggcctgc
gatgaagagctaaaaattgtactggcagcccctacgggcaaagcgcagcagcgtatgact
gagtctatcatgaatagcgtagaagggcttcgcggtaaggtaagcgataccgcgcttgat
agtgtgcctacagaggccgttaccctgcataggttgttaggactcagagaacatggcgtt
gcgacaaagtacaatcaacacaacaaactatctgccgacgtacttattgttgatgaagcc
agtatggttgatttagccctaatgacgcgcatagttcgggcgttacctgaccacgcgcgg
ttatatttcattggtgatgctgatcagcttccagcggttgagctaggcaatgtgcttgaa
cagttagttagcgatgaaactgcgctggatttttctcacgaaaacccattagccggcggt
gaaaacagtagtaatgagcgtacacttggtggtgtaccttcttcaatgcgacagcatatt
gccacgctttgcccgcatttgcctctgttacctgtaaatgaacaggcaaaaagctacgta
gcaacgttgcaagcgccgcaacgctttaaagggcaggtggctcgggtggcaacggcaatt
cagcgcggcgatgcgaacggtgcgcttgctgctattgcacaaaagaatagtggcagtaag
caaggcgataatgcttcacagccgaaaagcgctgatgaaaaaagcatcaatactaatagc
cgctcacgtttacagcctggtgttcacttatggccagaaagtcaacttggtggtcgtgag
ctacagcagctagcgaaagagagcttcttacccctatttgaagcccaaagtgcagaggag
gcgctcaaccgccttaattacgttaggtggttaacccctatacgtaaaggcgccatgggg
gtggaaggtttgaataacttggtgttcgatgccattaagcacaagatcaggcgacgtgag
ggacacttctatcaaggtcagcctattatgattgtaaaaaatcatcatccacagcgtttg
tccaacggcgaggtaggtgtaatttggccggacagcacgggcaaattgtatgcgtggttc
taccaggatacgtatgtcgaaggacaacaagcaggcaagagcttgaacgatagctcaaat
aacagtagcgcgcaaaatctagggcaacagaagcaagcgctacgcagcatatcgctatca
agagtaccgcagtttgaaaccgtgtatgccatgactattcacaagtctcagggctctgag
tttaatcacgttgtgcttattttgcccaaacccgaaagcgaaaaagccgctaacctgttt
caccgggggttagtctatacagggttaacgcgggcaaaagacgggtgcttaattatttcc
gatagcaatacattcagcggcatggtggcaacggttgataaacgctattcaggcttatct
agcgcaataagccgatgcgctgaaaaagtactctga
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