Alteromonas mediterranea UM7: I635_11935
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Entry
I635_11935 CDS
T02724
Name
(GenBank) metallo-beta-lactamase family protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
amai
Alteromonas mediterranea UM7
Pathway
amai03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
amai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
I635_11935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amai03019
]
I635_11935
Messenger RNA biogenesis [BR:
amai03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
I635_11935
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_J_b_CASP
Lactamase_B
Lactamase_B_2
RMMBL
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
AGP97907
LinkDB
All DBs
Position
complement(2668125..2669510)
Genome browser
AA seq
461 aa
AA seq
DB search
MLHPTIDDLWFVPLGGTGEIGMNLNLYGHNGRWLMVDCGVSFDEPLVPDYKKGSNIGSTE
SKGATHRVVAPDPSFIANQKDALAGIVITHAHEDHVGAIPYLWERFRAPIYTTSFTAEVL
RRKLARSKLANRVPIIEVDAGDTLQIGPFSVNWLAITHSLPEPFALKIATPVGTVLHTAD
WKIDANPITGLPFDVNLYKQLGRENILAMVGDSTNAPKPGFSISERNCYDGLLSTIAPVK
GRVVVGCFGSNIARLISIAKVAKKTKRYMALYGRSLMNMYGIAKQQGIWPDDLPITDPQH
LGYLPPHEVLAVATGSQGEKNTALARLAKDSHPHLQLEKGDTVLFSSIVIPGNEESVERL
SKALAAKGVAVIHSEDSTLPIHASGHPCEEELKLMYHWVKPEIAIPVHGEHSHLKAHADI
AKASGVSKHYVGQNGDLYRLAPQPSIRRQVIPVGRIPVQQD
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
ttgttgcacccaactattgacgacttgtggtttgttcccttagggggcactggcgaaata
gggatgaatctcaacttgtacggccacaatggccgttggttaatggtggactgcggtgta
tcgtttgacgagcctctcgttccagactataagaagggcagcaatattggttccactgaa
tctaaaggtgcaacacatcgggtggttgcgccagacccttcctttattgcaaatcaaaaa
gacgcgttagcggggattgttatcacccatgctcacgaagatcacgtgggcgctatacct
tacctatgggaaaggtttagagcgccgatttatacaacgtcgtttaccgctgaggtgcta
aggcgcaagctagcaagaagtaaattggcaaatcgggtgccgataatagaagtagatgca
ggtgatacccttcaaattgggccttttagcgttaactggcttgccattactcattcgttg
cctgaaccatttgcccttaaaattgcgacgccggtaggtactgtccttcataccgcagat
tggaaaattgatgctaaccccatcacaggcttgccgtttgatgtaaatctgtataagcaa
ttaggtagagaaaatattctcgccatggtgggagattctactaatgcccccaaacctggc
ttttctatttccgaaagaaattgctacgacgggttgctgagcacaattgctcctgtaaag
ggtagggtagtggtaggttgtttcggcagtaatattgcgcggcttatttcaatagccaaa
gtggcaaaaaagactaagcggtacatggcgctgtatggccgttcgcttatgaacatgtac
ggtattgcgaagcaacagggtatttggcccgatgacttgccaattaccgatcctcagcat
ttaggctacctacctcctcacgaagtacttgcagtggctacaggtagtcaaggggagaaa
aataccgcgctggcgcgactagcaaaagacagccatccgcatttacagctggaaaaagga
gataccgtattattttcctcaatagtcataccgggcaatgaagaaagtgtagaacggtta
agcaaagcgttggcggcaaaaggcgtagcagttatccatagcgaggatagcacattgcca
attcacgcaagcggccacccttgtgaagaagagctcaaacttatgtatcactgggtcaaa
cctgagattgctattccggtccatggtgagcattcacaccttaaggctcacgcagacatt
gcgaaagcgagtggtgtttcaaaacattatgtagggcaaaacggcgacttgtaccggtta
gcgccgcagccaagtattagaagacaggttatcccggtgggccggatccccgttcaacaa
gattaa
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