Alteromonas mediterranea UM7: I635_16535
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Entry
I635_16535 CDS
T02724
Name
(GenBank) transcriptional regulator
KO
K20918
LuxR family transcriptional regulator, positive regulator of biofilm formation
Organism
amai
Alteromonas mediterranea UM7
Brite
KEGG Orthology (KO) [BR:
amai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amai03000
]
I635_16535
Transcription factors [BR:
amai03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
I635_16535
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GerE
Sigma70_r4_2
VpsT-like_REC
HTH_23
SH3-B_UBE2O
Motif
Other DBs
NCBI-ProteinID:
AGP98812
LinkDB
All DBs
Position
3722898..3723575
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AA seq
225 aa
AA seq
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MSHQAFVLTRKSFSENTKQDGAHERFLSILPSCGFVVSTGAIHPPRSVLNNTYTFFIDAQ
YCDSATMLNLPVVNDNPELNKVIFNVPESDVDFHYAALQHGINGIFHIEDSLELLVRGVQ
QVQAGNKWFSREIMSRYIDANLVSKAKPVAALQSSHTVLTKRELSITRKIADGAQNQEIA
DCLHISVNTVKTHVYSIFRKTDCRNRVELIKWFDHQFSQPQRVSI
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgtcacatcaagcgttcgttttaacaagaaaaagtttttcagaaaatactaaacaggat
ggggctcacgaacgattcctaagtattttgccgtcatgtggatttgtcgtctcaaccggt
gcgattcatccacctcgaagcgtgcttaataacacctataccttctttatcgatgcgcag
tattgtgactctgccactatgctcaacttgcctgtagtcaacgataatccagagttgaac
aaagtcattttcaacgtgccagagtctgacgtcgattttcattatgcggcactacaacat
ggtattaacggtattttccatattgaagatagcttagaacttctggttcgcggtgttcaa
caagttcaggcgggcaacaaatggttcagtcgcgagattatgagtcgctatattgatgcc
aacctagtgtctaaagcaaaacccgttgctgcacttcaatcgtcacatactgtgctgacc
aagagggaattatccatcacacgcaaaattgcagatggtgcccaaaatcaggagattgca
gactgcttacacatcagcgtaaatacggtgaaaactcacgtttacagcatatttagaaag
acggactgccgaaatcgcgttgagcttataaagtggttcgatcatcagtttagccaacca
caacgagtaagtatctaa
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