KEGG   Alteromonas mediterranea UM7: I635_17850
Entry
I635_17850        CDS       T02724                                 
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
amai  Alteromonas mediterranea UM7
Pathway
amai03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:amai00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    I635_17850
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:amai03021]
    I635_17850
   03400 DNA repair and recombination proteins [BR:amai03400]
    I635_17850
Enzymes [BR:amai01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     I635_17850
Transcription machinery [BR:amai03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     I635_17850
DNA repair and recombination proteins [BR:amai03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      I635_17850
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_L RNA_pol_A_CTD
Other DBs
NCBI-ProteinID: AGP99071
LinkDB
Position
complement(4044258..4045244)
AA seq 328 aa
MGSVTEFLKPRLVEIENVSPTRAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVEI
DGVLHEYSTKEGVQEDVIEILLNLKGLAVRLEGKTEATLTLVKSGAGPVVAGDIQHDGDV
EIANPEHVICTLTGEAEISMRIKVEMGRGYVPASTRRSSEEDDRPIGRLLVDASYSPVER
IAYSVESARVEQRTDLDKLIIDMETNGTLDPEEAIRRSATILAEQLDAFVDLRDVSEPEA
KEEKPEFDPILLRPVDDLELTVRSANCLKAEAIQYIGDLVQRTEVELLKTPNLGKKSLTE
IKDVLASRGLSLGMRLENWPPESIAEKD
NT seq 987 nt   +upstreamnt  +downstreamnt
gtgggttctgtgactgaattcctaaaaccgagattagttgagatcgaaaacgtttctcct
actcgtgccaaagtaactttggaaccactagagcgcggctttggccatactctaggtaac
gccctacgtcgtattttactgtcatctatgccaggatgtgcagttaccgaggtagaaatt
gatggcgttcttcacgagtacagcaccaaagaaggtgtacaagaagacgttatcgaaatc
ttgctaaatcttaaaggtttagcggttcgccttgaaggtaaaactgaggcaaccctaact
ctagtgaaatctggcgctggccctgttgttgctggtgatattcagcatgatggcgacgta
gaaattgcaaaccctgagcatgttatttgtactttgactggcgaagctgaaatcagcatg
cgcatcaaagtagaaatgggccgtggttatgtaccagcttctacccgtcgctcctctgaa
gaagatgatcgtccaattggtcgtttgttagtagacgcttcatacagcccagttgaacgt
attgcttacagtgtagagtctgcacgtgttgaacaacgcacagacctagacaaactaatc
atcgacatggagacgaacggtactttggatcctgaagaagcgatccgccgttctgctact
atcctagctgaacagctagatgcattcgtagacctacgtgatgtatctgagccagaagcg
aaagaagagaagccagaattcgatccgattctgcttcgcccagtagatgacctagagcta
acagtacgttctgcaaactgtttgaaagcagaagctatccagtacattggtgacctggta
cagcgcactgaggttgagctacttaaaacgccaaaccttggtaagaaatcgctaactgaa
atcaaagatgttctagcatctcgtggtctttctctaggtatgcgcctagaaaactggccg
ccagagagcatcgctgaaaaagattaa

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