Acetobacterium malicum subsp. dehalogenans: ACIUZZ_05190
Help
Entry
ACIUZZ_05190 CDS
T11223
Name
(GenBank) PD-(D/E)XK nuclease family protein
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
amaj Acetobacterium malicum subsp. dehalogenans
Brite
KEGG Orthology (KO) [BR:
amaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amaj03400
]
ACIUZZ_05190
Enzymes [BR:
amaj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ACIUZZ_05190
DNA repair and recombination proteins [BR:
amaj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
ACIUZZ_05190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
XOB59412
LinkDB
All DBs
Position
1079587..1082940
Genome browser
AA seq
1117 aa
AA seq
DB search
MGITMIVGRQSQVLSEAVYHQIGAALDAGKEKLYLMVPEQFTLGAEEALIKANGLAGLLN
VEVLSPKRLGNRVLQETGGLTKTYMDSHGKNMLLQKTLGDIQEQLTIYRSSVKKPGFLIS
IADLIAELKQNEIAPENLEQTRKTLSQGIMPQKLGDVIKIYRHFQELLGNDRKDEEDFRN
FVCEKIPTAEFLQNSEIWMDGFQNFSAQDYRMIGNLVDTVKEIHIALPWDPDPSARDQEV
FQLTANTMDNLKEIGARAQVAFKLEKISGKNQTSPELAHLEANLFAYPKLEYPEAVKQIS
LTQCQNTWEEVEMGARKILELIREEGLSFRDMVVLAGDLEEYGSIIKRIFTQYQIPFFMD
DLRAIGDNHLIEAVVTALEVIQNNYRLDDVFGFVKTGFSPITLSECEDLENYALEFGIRG
KQWDQEFTKVSQNPALDLGNLNQLRLKLITPLTQLKADLKAGRSCQDYTRSLYEFLVRIK
TPEKIEALVEQLSESGNYEAMEIYHQIWNILMEVFDQIVETMGNDETTREEYLRILKSGF
QGYRLGIIPPYRDYVSITDLRRSRSSAFEVLIVFGLNEGKIPGSGSEPNLFSDLERQILG
AHQIRLQNNRSFQMDQERFLVYDLLSKPKSRLALHWALADMEGNSQQPSILLSQILGIFP
KIEILSTLNDGVAAFWNTLSTPDATLWHLIRHLRDSRSEAGSTQQLEEALWAEVQDWYQN
NPDYQQIISNLTEALNYAGVSQAMTGTEAAVLYGKNLRTSITRLETHRQCPFSHYVRYGL
KPESRPIYNIAAPEIGTLLHELIDGFFREVHEQKLDLRTLPKNQRDNLLEGVMESCLPQI
KTNVFNSTGQNQYLGKKLERVGKKSIDILVQQLCAGDFEPQATEFSFEQELSLPDAKLGE
VKIYGKIDRLDLYEKDGHTWVKVIDYKTGSKKLGYDDIYYGLSLQLLVYLDGAMTVIDAE
DILPGGTFYFYVDDPMPRLDFGENVLAAINKSFKLNGLLLDDEMVIAAMDHEADGKKSDI
LPVYRSEFKLNREEFTGIIDYVRKTVIRQIKNIYEGDIKIRPYKKGHDYACQYCDYKGIC
QFDDAITRGGYEVLKAAMKKEQFFTLIQEGESDEMDK
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
atgggaattacaatgatcgtgggccggcaatctcaggttttgagtgaggcggtttatcac
cagatcggtgcggcgctggatgcgggtaaagaaaaactctatttaatggttccggaacag
tttactcttggggctgaagaagccttgatcaaggccaatggcctggctggactgctgaat
gtggaagtgctgagtcccaaacggctgggaaaccgggtcctacaggaaaccggcggtctt
accaagacctatatggacagtcacggaaaaaatatgctgctacaaaaaaccctgggggac
attcaggaacaattgaccatttatcgttccagtgttaaaaagcccggttttctgatcagt
attgcggatctgattgccgaactcaaacagaatgagattgccccggaaaatctggaacag
accagaaagactctgagtcagggaatcatgccccagaaattgggggatgtgatcaaaatc
tatcgccattttcaggaattgctgggaaatgatcgtaaagatgaagaagactttcgcaat
ttcgtctgcgaaaaaataccaacggcagaatttctgcaaaatagcgaaatttggatggat
ggctttcagaatttctcagctcaggattaccgcatgattggaaatctggtcgatacggtc
aaagaaatccatattgccctgccctgggacccggatccatcagcacgggaccaggaagtt
tttcaattgaccgccaataccatggacaacctcaaagaaattggggccagagcgcaggtt
gcatttaaattggaaaagatttccgggaaaaatcaaacaagtccggagctggcccatctg
gaggctaatctctttgcttatcccaagctcgaatacccggaagcagtcaagcagatcagc
ctgacccagtgccagaatacctgggaagaggtggaaatgggcgcccgcaagattcttgag
ttgattcgggaagaagggctgtcctttcgggatatggtggttctggccggagatctggaa
gaatatggtagtattatcaagcgtatttttacccagtatcagatccccttttttatggat
gatctccgtgccatcggggataatcatctgatcgaagcagtcgtaacggctttggaggtg
atccagaataattaccggcttgatgatgttttcggttttgtgaaaaccggcttttcaccg
atcactctgtccgaatgcgaagatctggaaaattatgccctggagtttggtatccggggt
aaacaatgggaccaggaatttaccaaagtcagccagaatccggcgctggatctgggcaac
cttaatcagctacggcttaaactgattacccccctgacccagctcaaagcggatctgaag
gctggccgaagctgccaggattatacccgatccctctatgaatttctggtaaggatcaaa
accccggaaaaaatagaagctctggtggaacagctatcagaatcaggtaattatgaagcc
atggaaatttaccaccagatctggaatattctgatggaagtttttgatcagattgtcgaa
acgatgggaaatgatgaaacgaccagggaagaatacctgcggattttaaaaagtggcttt
cagggctatcgtttgggaattatcccgccttatcgggactatgtcagcatcaccgatctg
cgccggagccgcagctcggcctttgaagtcttgattgtatttggactgaacgaaggaaaa
attcccggtagcggcagcgaacccaaccttttctcggatctggaacggcagattctcggc
gctcaccagatccgactgcaaaataatcgcagttttcaaatggatcaggaacggtttctg
gtttatgatctattatccaaacctaaatcccggttggcgctccattgggctttagccgat
atggaaggcaacagccagcagcccagcattctgctgagccagattctgggaatctttccg
aagattgagatcttatcgaccctgaatgacggcgtggcggcattctggaataccctcagc
acccccgatgcgaccctctggcatttgatcaggcatcttcgcgacagccggtccgaggct
ggttcgacccagcagctggaagaggccctgtgggcagaggtacaagactggtatcaaaac
aatccggattaccaacaaataatcagcaatctgactgaggccctgaactatgccggggtt
tcccaggctatgaccgggaccgaggctgctgttctttatggcaaaaacctgcggaccagt
attacccgcttggaaacccaccgccaatgccccttttcccattatgtcagatacggctta
aaacccgagagccggcctatttataatattgccgccccggaaatcggtaccctgctccat
gaactgatcgacggcttttttcgggaagtccacgaacaaaaacttgatctgcgtacgctg
cccaaaaatcagcgggataacctgctggaaggagtgatggaaagctgcctgccacaaatt
aaaaccaatgtctttaacagtaccggccaaaatcagtacctgggaaaaaaactggaacgg
gtcggaaaaaagtcgattgatatcctggtgcaacaactatgtgccggggattttgaaccc
caggctaccgagttcagctttgaacaggagttaagcctgccggatgcgaaactgggtgaa
gtgaagatctatggcaagatcgaccggctggatctctacgaaaaagacggtcatacctgg
gttaaggtcattgactataaaaccggcagtaagaaactgggttatgatgacatctattat
ggcctttcgcttcagttgctggtgtatctggatggggccatgacggttattgatgccgaa
gatattctgcccggcggaaccttctacttttacgtcgatgacccgatgccacggttggac
tttggtgagaatgtgctggctgccatcaataagtcctttaaactcaatgggctgctactg
gacgacgaaatggttatcgctgccatggatcatgaagcggacggaaaaaaatctgatatt
ctgccggtttatcggtcggaattcaagcttaaccgggaagaatttaccggtatcatcgac
tatgtccgcaaaaccgtgatccgacagatcaaaaatatttatgagggtgatatcaagatc
cgaccctataaaaaaggccatgactatgcctgtcaatattgtgattacaagggcatctgc
cagtttgatgacgcgatcacccggggggggtatgaggtgctgaaagcagcgatgaagaaa
gaacagttttttacattaattcaggaaggtgaaagcgatgaaatggacaagtga
DBGET
integrated database retrieval system
