Acetobacterium malicum subsp. dehalogenans: ACIUZZ_05930
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Entry
ACIUZZ_05930 CDS
T11223
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
amaj Acetobacterium malicum subsp. dehalogenans
Pathway
amaj02020
Two-component system
amaj02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
amaj00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ACIUZZ_05930 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
ACIUZZ_05930 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amaj03021
]
ACIUZZ_05930 (rpoN)
Transcription machinery [BR:
amaj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ACIUZZ_05930 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_36
HTH_11
LacI
Motif
Other DBs
NCBI-ProteinID:
XOB59552
LinkDB
All DBs
Position
1237164..1238615
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AA seq
483 aa
AA seq
DB search
MNIKFDLNITQTQKLIMTQEMRQSIEILQLTAMELNGLIETEIMENPVLEFNEVSIKEVV
PVNEDGGPLKGELVKEEPVVEQPPKEEIQWDEYFHSMENSDYRGQTQSSGDTDDEYGFEK
FTSQEKTLYEYLHFQFNMLEKNLSETEKRIGEYLIDCIDDNGYLIVDMDYVGNILEVDEE
SIQKMIKIIQGFDPSGVGCRNIEECLLIQLRQMGYDDEEVFMDIVRNHLIDLADNQFKRI
AQDTGLSIEDVYEFKEVIKTLEPKPGREFSCSERVSYVIPDGSIEIVNDELVVKVNDVSA
PRLRINNYYKGLLKNPDKNDETKLYLEKKLDSAAFLIKSIEQRRDTIKKVITAIAESQRG
FFFEGVGDLRPLTLKTIAETIEVHESTVSRAIRGKYIQTPKGTFALKFFFKRGYTQGEED
RSSDAIKRYIKELIEQEDKKKPLSDQKLSELLQEKNLDVARRTVAKYREALLIQPSSKRK
EYR
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcaaatttgatttaaatataacccaaacccaaaaattgattatgacccaggaa
atgcggcaatcgattgagattctgcagctgaccgcgatggaacttaatggtttgatcgaa
actgaaattatggaaaatccggtactggaatttaatgaggtgtcaattaaagaagtggta
cccgttaatgaagatggcggaccgctcaagggggaattggttaaagaagagcccgttgtt
gagcagccgcctaaggaggaaatccagtgggacgaatattttcacagcatggaaaattct
gactatcgcggccagactcagtcaagtggtgataccgatgacgaatacggttttgaaaag
tttacttctcaggagaaaaccctttacgaatatctgcattttcaatttaacatgttggaa
aaaaacctcagtgaaacggaaaaacgaatcggcgagtatttgattgactgtatcgatgac
aacggttacctgattgtcgacatggactatgtcggaaacattttagaagtcgatgaagaa
agcattcagaaaatgattaagatcatccagggttttgatcccagtggggtaggatgtcga
aatattgaagagtgtttactgattcaattgcgtcagatggggtatgatgatgaagaagtg
tttatggacattgtcagaaatcacctgatcgatctggccgataaccagtttaagcggatc
gctcaggataccggcttatcaattgaggatgtctatgaattcaaagaggtgattaaaacg
ctggaaccaaaacccggccgggaattttcctgttcggaacgggtgtcctacgtgatcccg
gatgggagcatcgaaattgtcaatgatgagctggtggtgaaagtcaatgatgtatcggca
ccccggttacggatcaataattactataaggggctgctcaaaaacccggataaaaatgat
gaaaccaaactttatcttgagaaaaaattggacagtgccgcttttctgatcaaaagcatt
gaacagcgacgcgataccatcaaaaaagtcattactgccattgccgagtcccagcggggg
tttttctttgaaggggtgggggatctgcggccgttaaccctcaaaacaattgctgagacg
attgaggtccatgaatctaccgtcagccgggcgattcggggaaaatatatccaaaccccc
aagggcacctttgccctgaagtttttctttaagcggggatatactcagggtgaagaggat
cgttcttctgacgccatcaaacgctatattaaggaattaatcgaacaagaagacaagaaa
aagccactgagtgatcagaaattgtcagaattattgcaggaaaaaaatctcgatgtggcc
aggcgcaccgttgccaaatatcgtgaagcacttttgatccagccctcctccaaacgaaaa
gagtaccggtag
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integrated database retrieval system
