Acetobacterium malicum subsp. dehalogenans: ACIUZZ_09330
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Entry
ACIUZZ_09330 CDS
T11223
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
amaj Acetobacterium malicum subsp. dehalogenans
Brite
KEGG Orthology (KO) [BR:
amaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
amaj03016
]
ACIUZZ_09330 (truB)
Enzymes [BR:
amaj01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
ACIUZZ_09330 (truB)
Transfer RNA biogenesis [BR:
amaj03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ACIUZZ_09330 (truB)
Prokaryotic type
ACIUZZ_09330 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
UPF0113
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
XOB60191
LinkDB
All DBs
Position
2010047..2010967
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AA seq
306 aa
AA seq
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MEKINSFNGYLNVYKEKGMTSHDVVFKARKILKTKKIGHTGTLDPDAQGVLVLCVGQATK
MVEYITDHEKVYQAEVILGRETDTCDLSGTIINESDQRISRDAFESILPQFMGDIQQRPP
IYSAIRVKGKKLYHYARNGETVEIPERDVHVAGISLLEFCEASQKAKIRVTCSKGTYIRS
LCRDIGSALGTLGCMGNLIRHRVGSFSIDDALTLTEIDAIVNHNPSTPLFFPLEYSLERY
PCVRATEQGRKFLLNGNKLFQWNIHESLENFQLGETLRLYDGDQLIGMGRYVQNEEGNYI
KPTKLL
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaattaacagtttcaatggctatctcaatgtttacaaagaaaaaggcatgaca
tctcacgatgtggtgtttaaggcccgaaaaattctgaaaacaaaaaaaattggtcatacc
ggaacgctggatcccgatgcccagggcgttcttgttttatgcgttgggcaggcgacaaaa
atggttgaatatatcactgaccacgaaaaggtttatcaagcagaagtcatcctcgggcgg
gaaaccgacacctgtgatttatcagggactattattaatgaaagcgatcagcggatcagc
cgggacgcttttgaaagtatcctcccccagtttatgggtgatatccagcagcgaccaccg
atctattcagctattcgggtgaagggaaaaaaactgtatcactacgccaggaacggcgaa
acagtggagataccagaacgggacgttcatgttgccgggatcagtctgctggagttttgt
gaagcgtcccaaaaagctaaaatcagggtaacctgttctaagggaacctatattcgctca
ctgtgtcgtgatatcggaagtgccctggggacgttgggatgcatgggaaacctgatccga
catcgcgttggcagcttcagcattgacgacgctttaaccctgactgagattgatgcaatc
gtcaaccacaacccgagtacaccgctttttttcccattggagtattcacttgaacgttat
ccctgcgtccgggcaaccgagcagggtcgtaagtttttactcaatggaaataagctgttt
caatggaatatccatgaatcgctggaaaattttcagctgggagaaaccctgcgcttatac
gatggcgatcagcttatcgggatgggcagatatgtccagaacgaagaaggtaactatatt
aaaccgacaaaactactgtga
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