Acetobacterium malicum subsp. dehalogenans: ACIUZZ_09345
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Entry
ACIUZZ_09345 CDS
T11223
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
amaj Acetobacterium malicum subsp. dehalogenans
Pathway
amaj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
amaj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACIUZZ_09345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amaj03019
]
ACIUZZ_09345
03016 Transfer RNA biogenesis [BR:
amaj03016
]
ACIUZZ_09345
Enzymes [BR:
amaj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
ACIUZZ_09345
Messenger RNA biogenesis [BR:
amaj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ACIUZZ_09345
Transfer RNA biogenesis [BR:
amaj03016
]
Prokaryotic type
tRNA degradation factors
ACIUZZ_09345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
PNPase
KH_1
GcvP2_C
Mug135_C
OB_RRP5_4th
KH-I_KHDC4-BBP
S1_RRP5
S1_2
Motif
Other DBs
NCBI-ProteinID:
XOB60194
LinkDB
All DBs
Position
2012417..2014495
Genome browser
AA seq
692 aa
AA seq
DB search
MNIFETQIAGRPFRVEIGEVAQLAKGAAMIRYGKTEILAVASASKKPREGMDFFPLSCDY
EEKQYSVGKFPGGFIKREGRPTERAILNSRLMDRPIRPLFPKGFRNDVQVVATVMSVDQD
NAPEIAAMIGSSIALSISDIPFNGPTGAVAVGYVDGNYVINPNEAEREISDLNLVVSGTK
DAIMMVEAGANEVSEELMLEAILLAHEEIKKIVAFQEEIIAVVGKEKQVYTLFTPAEEIK
AEIVAFLGDQLSTAVKTADKLERLDNIEATKNLVKEHFSETYPNQGNEIDEVLNSLVKKE
IRRMILEDRIRPDNRKMDEIRQITAKIDFLERPHGSGLFTRGETQVLSVVTLGVLGDVQK
LDGLSNEDSKRYIHHYNFPSYSVGEARPSRGPGRREIGHGALAERALIPVLPSEDVFPYA
IRVVSEVLSSNGSTSQASVCGSSLSLMAAGVPLKAPVAGIAMGLIKEDDKLAILSDIQGM
EDFLGDMDFKVAGTADGITAIQMDIKIDGINKQILTEALEQARIGRLHILGIMNEEIAES
RKDLSPYAPRIIIFQIKPDKIRDVIGSGGKVINKIIDDTGVKIDIEDDGRIFIASVDTES
GNRAKEIIENIVREVEVGEVLTGKVVRIMNFGAFVSLPGGKDGLVHISKLANERVNAVED
VVKIGDEVTVKVMEIDAQGRINLSRKAMLPKE
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgaatatttttgaaactcaaattgcgggacgtcctttccgggtggaaattggcgaagtt
gcacaacttgcaaaaggtgcggcgatgatcagatatggcaaaacagaaattttagcagtc
gcttcagcttctaaaaagcctcgcgaaggcatggatttttttccattaagctgtgactat
gaagaaaaacaatactctgtcggaaaattccccggcggttttattaagcgagaaggccgc
ccgactgaacgggcaatcctgaactcccgactgatggatcgaccgatccgacctcttttt
cccaaaggcttccgaaatgacgttcaggttgttgccaccgtgatgtccgttgaccaggat
aatgctccagaaattgcggcgatgatcggttcatcgattgccctgtctatttcagacatt
cctttcaatggccccaccggggctgtcgccgttggttatgttgatggcaactatgtcatc
aatcccaatgaagctgaacgcgaaatcagtgatctgaacctggttgtctccggaacaaaa
gatgccattatgatggtggaagccggtgccaatgaagtttctgaagaactgatgctggaa
gcgatcctgctggcgcatgaagaaattaaaaaaattgtcgctttccaggaagaaatcatc
gcagttgtcggcaaagaaaaacaggtttatacgctgttcaccccagccgaagaaatcaaa
gccgaaattgtcgctttcttaggcgatcaattatcaaccgccgtaaaaacagctgataaa
ctggaacgactggacaatattgaagcaacgaaaaacttagtaaaagaacatttctctgaa
acatatcccaaccagggcaacgaaatcgacgaagtccttaattcgttggtcaaaaaagaa
attcgtcgcatgattcttgaagatcgcattcgtccggataatcgaaaaatggatgaaatc
cgtcagattaccgctaaaatcgactttttagaaagaccccatggttcaggattgttcacc
cgaggtgaaactcaggtactttcggttgtaactctgggtgttcttggtgacgtgcaaaaa
ctggatggcttatcgaatgaagactccaaacgttatattcaccattataacttcccatca
tacagtgtcggcgaagcccgaccatcacgtggtcccggccgtcgtgaaatcggacatggt
gctttggctgaacgcgcgctgattccggtactgccatctgaagacgtatttccatatgca
atccgagttgtttctgaagtattaagctcaaatggttctacctctcaagccagtgtttgt
ggcagctcgctttcacttatggcagccggggtacctctgaaggcacctgttgctggtatt
gctatgggactgatcaaagaagatgataaactggcgatcctttccgatattcaggggatg
gaagatttccttggtgacatggacttcaaggtggccggaaccgctgacggtatcactgcc
atccagatggatattaaaatcgatggtatcaacaagcagatccttaccgaagcactggaa
caagcccgcattggtcgactgcatattcttggcattatgaatgaagaaattgccgagtcg
cgtaaagatttatcaccttatgccccacgaatcattattttccagatcaaacctgataaa
atccgcgacgtcatcggttctggcggcaaggtcattaacaagattattgatgataccggg
gttaaaattgatattgaagatgatggccgaattttcattgcttcagtggataccgaatcc
ggtaaccgggccaaggaaattatcgagaacatcgtcagagaagttgaagttggcgaagta
ttaaccggtaaggttgttcgaatcatgaattttggcgcctttgtttccctgccagggggt
aaagatggtttagttcatatttctaaattagccaatgaacgcgtcaacgccgttgaagac
gtggttaaaatcggcgatgaagtgactgttaaggttatggaaattgacgctcagggccgt
atcaatctttcccgaaaagcaatgctaccaaaggaataa
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