Acetobacterium malicum subsp. dehalogenans: ACIUZZ_12700
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Entry
ACIUZZ_12700 CDS
T11223
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
amaj Acetobacterium malicum subsp. dehalogenans
Pathway
amaj03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
amaj00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
ACIUZZ_12700
09124 Replication and repair
03420 Nucleotide excision repair
ACIUZZ_12700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amaj03021
]
ACIUZZ_12700
03036 Chromosome and associated proteins [BR:
amaj03036
]
ACIUZZ_12700
03400 DNA repair and recombination proteins [BR:
amaj03400
]
ACIUZZ_12700
Enzymes [BR:
amaj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
ACIUZZ_12700
Transcription machinery [BR:
amaj03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
ACIUZZ_12700
Chromosome and associated proteins [BR:
amaj03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
ACIUZZ_12700
DNA repair and recombination proteins [BR:
amaj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
ACIUZZ_12700
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
PhoH
Bac_DnaA
Motif
Other DBs
NCBI-ProteinID:
XOB57225
LinkDB
All DBs
Position
2748200..2750572
Genome browser
AA seq
790 aa
AA seq
DB search
MINQPEIKLSVRNLVEFMLRSGNIDSQFISNASALEGTRAHQKVQKDNRDKGYTPEVSLK
YSFAYEGFNFRIEGRADGIIASATGIIVDEIKSTNRLLESIDADYSETHWAQAKCYAFIY
AVQNELPEISVQLTYFQLDSDEIKQFLKVFNQAELTTFFYELIDQYLIWARLTSDWVAKR
NTAIRALDFPFASYRRGQRELAVAVYKTIAEQQKLFVQAPTGIGKTMSTLFPAIKSMAEG
HTAKIFYLTAKTIVREVAEEAFAKMAEQGLAFKSVTLTAKDKICFQAETICDPDHCEYAR
GHFDRVNGAILDLLEQENRLTRPLIEDYAHKHQVCPFEFSLDLTLWCDCVICDYNYVFDP
RVYLKRFFTDNGGDYTFLIDEAHNLVDRARSMFSAELYKKPFLELKRLFKDSDPGIAKAL
GKLNTHMIGLRKLAETSQHYRQSEAPKDFLPLLLTFINLAEAWLVKNEGNDSHEQLLELY
FNALTFMRTAEFYDDRFLTYVENGNGDTKIKLFCLDPSHLLNEAIKRGRAAIFFSATLSP
LDYFAEILGGDPDSYKISLPSPFDVKNRELLIADTISTTFRNREKTYPVIADRIKTVLAQ
QPGNYLVYFPSYKYMNAVFEIFSASYPEVATIRQAPEMNEEDRELFLAQFRLAPGAAPAG
MLGFAVLGGIFSEGVDLKHEGLIGAIIVGVGLPQICFERDIIRDYFNEKNHAGYEYSYLY
PGMNKVLQAAGRVIRTETDRGVIVLIDERFSSPSYRQLFPREWFPHRRIRNAAELEKALQ
DFWAMAESQN
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgatcaatcaacccgaaataaaactatccgttcgaaatctggtcgagtttatgctccgt
tccggaaatatcgactcccaattcatcagcaacgccagcgctctggaaggaacccgagcc
caccagaaggttcagaaggacaatcgggacaagggctatacccccgaggtatcgctaaaa
tacagcttcgcctatgaaggtttcaacttccggatcgaaggccgggccgacggcatcatc
gccagcgcgaccgggattattgtcgacgagatcaagtctactaaccggctcctggaatcc
atcgacgccgattacagcgaaacccattgggcccaggccaaatgctacgcttttatttac
gccgtccagaatgagctgccggaaatcagcgttcagttgacctattttcagttggacagc
gatgagatcaagcagtttctaaaagtctttaaccaagccgaactgaccactttcttttac
gagctgatcgatcagtacctgatctgggcccgtctgaccagcgactgggtggcgaagcga
aatactgccatcagggctctggattttccctttgcaagctatcgccggggccaacgggaa
ctggcggtggcggtttataaaaccattgccgaacagcaaaaactgtttgttcaggctcct
accggaatcgggaaaacgatgtcgaccctatttcccgctatcaaatcaatggctgaaggg
catacggccaaaattttttatctgaccgccaaaaccattgtccgggaggtagccgaggaa
gcctttgccaaaatggcggagcaggggctggcttttaaaagcgtcaccctcaccgccaag
gataaaatctgttttcaggccgaaaccatctgcgatcccgatcactgcgagtacgcccgg
ggtcatttcgatcgggtcaacggcgctattcttgatctgctggagcaggaaaaccgcctg
acccggccactcattgaagactatgcccacaagcatcaggtctgcccctttgaattttcc
ctggatttaacgctctggtgtgactgcgtgatctgtgattacaactatgtctttgatccc
cgggtttatctcaagcgcttttttaccgataacggcggcgactacacctttctgattgac
gaggcccacaatctggtggaccgggcccgctcgatgttttcggcggagctttataaaaaa
ccattcctggagctgaagcgcctgtttaaggatagcgatcccggcatcgccaaggcgttg
gggaaactcaatacccatatgatcgggctacggaaactggctgagaccagccagcattat
cgccagtcggaggcgcccaaagattttttaccgctactgcttacgtttattaatctggct
gaagcatggctggtcaaaaacgagggcaacgactcccacgaacagttgctagaactgtat
ttcaacgccctgacctttatgcgtaccgccgagttttacgacgaccgctttctgacctat
gtggaaaacggcaacggtgataccaaaataaagctcttttgtctggacccctcccacctg
ctgaacgaagccatcaaacgggggcgggcggcgatctttttttccgccacgctgtcgccg
ctggactattttgcggaaattctgggcggcgaccccgacagctataagatcagcctgccc
tcgccctttgatgtcaaaaaccgggaactgctgatcgccgataccatctccaccaccttc
cggaaccgcgaaaaaacctaccccgtcattgccgaccggatcaaaacagtattggcgcaa
caaccgggcaactatctggtctattttccctcttataaatatatgaacgcagtgtttgag
atttttagcgccagctacccggaggtcgccaccatccggcaggctccggaaatgaatgag
gaggaccgggagctgttcctggctcagttccgactggcacccggtgctgccccggccggg
atgctgggctttgcggtgctgggcgggatcttttccgaaggcgtggacttaaagcacgag
ggcctgatcggcgccattattgtcggagtgggtctgccccagatctgttttgagcgcgac
atcatccgcgattattttaatgagaaaaaccacgccggctatgaatattcctacctctac
cccggcatgaacaaggtcctccaagccgccggacgggtgatccggaccgaaaccgaccgc
ggcgtaatcgtcctgattgatgaacgcttcagcagccccagctatcgccagctgtttccc
cgggagtggtttccccatcgccggatccgaaatgcggccgagctggaaaaagctttgcag
gatttctgggcgatggctgaatcgcaaaattga
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