Acetobacterium malicum subsp. dehalogenans: ACIUZZ_13140
Help
Entry
ACIUZZ_13140 CDS
T11223
Name
(GenBank) sigma-54 interaction domain-containing protein
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
amaj Acetobacterium malicum subsp. dehalogenans
Brite
KEGG Orthology (KO) [BR:
amaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amaj03000
]
ACIUZZ_13140
Transcription factors [BR:
amaj03000
]
Prokaryotic type
Helix-turn-helix
Other families
ACIUZZ_13140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_5
AAA_2
Mg_chelatase
AAA
bpMoxR
AAA_16
NB-ARC
MCM
IstB_IS21
HTH_11
AAA_22
HTH_30
AAA_7
HTH_28
HTH_23
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
XOB57310
LinkDB
All DBs
Position
complement(2845884..2847800)
Genome browser
AA seq
638 aa
AA seq
DB search
MEDKILNKWIANHKYHEKREEMDQLKYDSWEKSINKGINPLVAKPQKVTENEFIQIKRQS
KRTYIYSNSILSELERESTREQIGCVLFDADGCILKLYGNSEFKEWANEIGIEPRTIWNE
STIGTNAFSLGIKSKSVIELTGEENFSKLLIKTACYFYPLKLENDLIYGGLMLVVPVEAK
SSYLREAVVSIARSIDLQVLWFKLINQYGEMVDGYGVISLDQSNGENRILTISRSIFKMF
DVKNEDYYYLRLEELIGIEPKNKEFWKIINNKIIVNDKRISIVVRKKELSINISTTKFKE
EKFHMNGIAIAINSIQRINKLINQYTGNNAQYTFDNIIGKSDIYQKILERSRIAAASNGN
VLLLGESGVGKDVIAQAIHNSSDRVNGPFIAINCASFSRELIGSELFGYEEGAFTGARKG
GNIGKFELAKNGTLFLDEIGDMPLDIQATLLRVIEQKSFMRIGSNTLTKVDVRIIAATNN
NLAEKIKNNLFREDLFYRLGVIRINIPPLRKRTEDILLLAYYFIERICKRINRQQAKLTP
DAEARLLKYQWPGNVRELQNLMEGILSTTVEKNINADIITNYLSLDFWEMNDFQGELSEK
ERIIEALKINRNNKVKTAEYLEISRRTLYRRLEEYDLL
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atggaagacaaaattctaaataaatggatagcgaatcataaataccatgaaaaacgcgaa
gaaatggatcagctgaaatatgattcttgggaaaaaagcataaacaaaggaataaatcca
ttagttgccaaacctcaaaaagttacagaaaatgaattcatccaaattaaacgacaatct
aaacgaacctatatttattcaaacagtattctaagtgaattggaaagagaaagtacaaga
gaacaaatcggatgtgttctttttgatgcagatggatgcatattaaaattatatggtaat
tcggaatttaaggaatgggcaaatgaaattggtattgaaccacgaacaatctggaatgaa
agcactattggaacgaatgcattttcattgggaattaaaagcaagtcagtgatagaactc
actggtgaagagaacttttccaaattattgattaaaacagcttgttatttttatccgctt
aagcttgaaaatgatcttatatatggtggattaatgttggttgttcctgtcgaagctaag
agtagttatctaagagaagcagtagttagcattgcccgtagcattgacttgcaagtcctt
tggtttaaactaattaatcaatatggagagatggtggatggatatggcgtcattagttta
gatcagtctaatggtgaaaatagaattttaacaatcagtcgcagtatatttaaaatgttt
gatgtcaaaaatgaagattattattatctacgattagaagaattgatcggaattgaacct
aaaaataaggaattttggaaaattattaataataaaataatagtcaatgataaacggatt
agtattgttgttaggaaaaaggaactcagcattaatatcagtactacaaaattcaaagaa
gaaaaatttcatatgaatggaatcgccattgctatcaattctatacaacgaataaataaa
ttgataaaccaatataccggaaacaacgcccagtatacctttgacaacattatcgggaaa
agtgatatttatcagaaaattttggagcgttctagaattgcagcagcttctaatgggaat
gtgttactgttaggggaaagtggagttggaaaagacgttattgctcaagccatccacaat
agtagtgatcgtgtcaatggcccctttattgctatcaattgtgcatctttttcaagagaa
ctcatcgggagtgagctttttggttatgaagaaggtgcatttactggtgctagaaaaggt
ggcaatatcggaaaatttgaattagctaaaaatggaaccctttttttagatgaaatcggt
gatatgcctttggatatacaagcgaccttgcttcgtgtaattgaacaaaagagctttatg
cgaattggcagcaatactttaaccaaagtagatgttcgaatcattgccgcaacgaataat
aatttagctgaaaaaattaagaacaatttatttcgtgaagacttattctatcgtttaggc
gttatacgtattaatataccaccattgagaaaaagaactgaagatattcttcttcttgca
tactactttattgagcggatttgtaaaagaattaacagacaacaagctaagctgactcca
gatgcagaagcacggttattaaaatatcaatggccgggaaatgttcgggaacttcaaaat
ctaatggagggaatattaagtacaacagtggaaaaaaatataaatgcagacattattaca
aattacttatctctcgatttttgggaaatgaatgattttcagggtgaattaagtgagaaa
gaaagaattattgaagcactaaaaatcaatcgaaataataaggttaaaacagcagaatat
ctagagatttcaagacggacattataccgtcgccttgaagaatatgatttgttgtaa
DBGET
integrated database retrieval system
