Acetobacterium malicum subsp. dehalogenans: ACIUZZ_14055
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Entry
ACIUZZ_14055 CDS
T11223
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
amaj Acetobacterium malicum subsp. dehalogenans
Pathway
amaj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
amaj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
ACIUZZ_14055 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amaj03400
]
ACIUZZ_14055 (xseA)
Enzymes [BR:
amaj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
ACIUZZ_14055 (xseA)
DNA repair and recombination proteins [BR:
amaj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
ACIUZZ_14055 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
RecJ_OB
Fe-ADH
Motif
Other DBs
NCBI-ProteinID:
XOB57478
LinkDB
All DBs
Position
complement(3028300..3029511)
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AA seq
403 aa
AA seq
DB search
MTNAKILSVSELNQYLKTLLESNSLLRNLVIQGELSNVKRAASGHLYFSLKDAGSKIDCV
MFKNAAIGLKFLPKEGQKVTLRGSLGVYLPSGQYQITVRSMEPQGLGDLFQAYLVLKAEL
EASGYFDQEHKKKLPEIISRVGLVTSPSGAAVKDMISIIKRRNPLMDIVIYPSLVQGDEA
AGNIIKGIRAFNAAQSVDVIIIGRGGGSIEDLWAFNDEQLAKAIFESELPIVSAVGHEID
YTIADFVADLRAPTPSGAAELVAEETLSMVRALVTQKNRLIEIMEVKIDKNREILTRMKK
EILRFRPKERIEEMRLHLDVINDRMIRALNNRIKNERQQLINVKTRIEAMSPVNVLKKGY
VRVTDNNGSPIVAVTGLTVDQLVTLHFADGEAEANIQSTKENK
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
gtgacaaatgcaaaaatactcagtgtatcggagcttaaccaatatcttaaaaccctattg
gaatccaatagtctgctgcgaaatctggtgatccagggagaactatccaatgtcaaacgg
gcggcatcaggtcatctgtatttttccctgaaagatgccggcagtaaaattgattgcgtg
atgtttaaaaatgccgccattggacttaaattcctgcccaaggaaggtcagaaggtgacg
ctgcgggggagcttaggtgtttatctgcccagtggccaatatcagattacggtccggtcc
atggaaccccagggcctgggggatctgtttcaggcctatctggtattaaaggcagagctg
gaagccagcggctattttgaccaggagcataaaaaaaagctgccggaaatcatcagtcgg
gtgggtctggttacttctccatctggagcagcagtcaaagatatgatttcaattatcaaa
cgccggaatcccctgatggatattgtcatttatcccagtctggttcagggtgatgaagcg
gccgggaatatcatcaaagggattcgggcctttaatgccgcccagtcagtggatgtgatt
attatcggccggggcggcggttccattgaagacttgtgggcttttaacgatgagcaactg
gctaaagccatttttgaatcggaattgccgatcgtttcagccgtgggccatgaaattgac
tataccattgccgattttgtggctgatttacgggcacccactccttctggcgcggccgaa
ctggtagccgaagaaaccctgagtatggttcgggctctggttactcagaaaaaccgtctg
attgagattatggaagtaaaaatcgataagaaccgcgaaattttaacgcggatgaaaaaa
gaaatcctgcggtttcgacccaaagaacgaatcgaagaaatgcggctgcacctcgatgtc
attaatgaccggatgatccgggcactgaataaccggattaaaaatgagcgacagcaattg
atcaatgttaaaacccggatcgaagccatgagccctgtgaatgtgctaaaaaaaggctat
gttcgcgtgacggataacaatggttcaccaattgttgcggtgaccggtttaacagtcgat
cagctggtgaccctccattttgcggatggcgaagctgaggcaaacattcaatccacgaag
gagaataaataa
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