Acetobacterium malicum subsp. dehalogenans: ACIUZZ_14095
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Entry
ACIUZZ_14095 CDS
T11223
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
amaj Acetobacterium malicum subsp. dehalogenans
Pathway
amaj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
amaj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACIUZZ_14095 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amaj03021
]
ACIUZZ_14095 (rho)
03019 Messenger RNA biogenesis [BR:
amaj03019
]
ACIUZZ_14095 (rho)
Transcription machinery [BR:
amaj03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
ACIUZZ_14095 (rho)
Messenger RNA biogenesis [BR:
amaj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ACIUZZ_14095 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
S1CSD-TOTE-2
HTH_KIF26A_B_1st
AAA_25
Mor
NACHT
HeH
Motif
Other DBs
NCBI-ProteinID:
XOB57486
LinkDB
All DBs
Position
complement(3033631..3035397)
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AA seq
588 aa
AA seq
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MEKKSLEDLTVVELRKQAEHLGIEKTSRLKKIELIEAIEEKLESSADQADLQNHQHAHHH
EIKEKERLTDDKEIPEKTPTEKNIHEKQPSQTNQRITNGSNGNGARSPYYKIKDSMDNVV
VVEGNLEILPEGFGFVKNKEMKSNEEFVYISGSQIQKFKLETGDVLSGKVRPPKTGEKYS
AMLFLEKVNGTKTADIIQKINSMLYVDDKKDLDRFKNSQEGILDVNPDGFGFLRTNHYLS
GDHDIYVAANQIRRFNLRTGDKILGKIKMSGENEKFDALLYVEKVNGDIPEKIANRPRFE
RLTPIFPEERITLETTQDVVSTRMIDLFSPMGKGQRGLIVAPPKAGKTILLKEIATGITT
NHPEIELIILLVDERPEEVTDMKRSIDADIVYSTFDQPPENHIKVAEIVLERGKRLVEQG
KDVVILVDSLTRLTRGNNLVVSPSGRTLSGGLDPEALFFPKKFFGSARNVEEGGSLTILA
TALVDTGSRMDDIIFEEFKGTGNMELHLERELAERRIYPAINLNRSGTRREEKLLTAEEL
KVSFDIRKLYKGTTVYDLTDKIISILERTKDNKAFMKKFIDKYNAQNI
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
ttggaaaagaaatcactggaagatttaacggttgttgaattgcgtaaacaggcagagcat
ctgggtatcgaaaaaacaagccgacttaaaaaaattgaactcatcgaggccatcgaagaa
aaattggaatcctcggcagatcaagctgatcttcaaaatcatcagcacgcgcatcatcac
gagataaaggaaaaagaacgattgacagacgataaagaaataccggaaaaaacaccaact
gaaaaaaatattcatgaaaaacagccgagccagaccaatcagcggatcactaatggatcg
aatggaaatggtgcccgttcaccctattataagatcaaagattccatggataatgtcgtg
gtggtggaaggaaatctggaaatcctgccggaaggttttggttttgttaaaaacaaggaa
atgaaatccaatgaggaattcgtttatatttccggttcgcaaatacagaagttcaaactg
gaaactggcgatgtccttagcggcaaggtccgtccgcctaaaactggtgaaaaatattca
gcgatgttatttctggaaaaggtcaatggcaccaaaactgcggacattatccagaagatc
aatagtatgctctacgtcgatgataaaaaggatctggaccgctttaaaaactcccaggaa
gggattttggatgtcaacccggatgggtttggttttctgagaaccaatcattatttatcc
ggtgaccacgacatttacgtggcggccaaccagatccgtcgctttaatctccgtactggc
gataaaatcctggggaaaattaagatgtccggcgaaaatgaaaaatttgacgcgttgctt
tatgtggaaaaagtcaacggtgacatccccgaaaaaattgccaatcgaccccgatttgaa
cggttgacaccaatttttccagaagaacggatcaccctggaaacaacccaggatgttgtg
tcaacccggatgatcgatctgttttcaccgatgggtaaaggtcagcggggactgattgta
gcaccaccgaaagctgggaaaacgattctgttaaaggaaatcgccaccggcattactacc
aatcatccggaaatcgaactgattatcctgctggtggacgagcggccggaagaagtcacc
gatatgaagcgatccatcgatgcggatattgtctattcaacctttgatcagccgcccgag
aatcacatcaaggtagctgaaatcgtgttggaacggggtaagcggctagttgaacagggc
aaagatgtggttatcctggttgatagtttaacccggctgacccggggaaataatctggta
gtttcgccttcaggccgaaccctgtccggggggcttgatccggaagcgttattctttcca
aaaaaattcttcggttcggcccgaaatgtggaagaaggcggcagtttgaccattttggcc
acagccctggtggacactggcagccgcatggatgatattatctttgaagaattcaagggt
accggaaacatggagctgcatttggaacgggaattagctgagcggcggatctacccggcc
atcaatctgaaccgttctggcacccgtcgggaagaaaaattattaaccgccgaagagctg
aaagtcagttttgacattcgtaagctttacaagggaaccacggtttatgatctcaccgat
aagattatttcgattctggaacgcaccaaagataacaaagcgtttatgaaaaaatttatt
gataaatataacgcacaaaatatttga
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