Acetobacterium malicum subsp. dehalogenans: ACIUZZ_16200
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Entry
ACIUZZ_16200 CDS
T11223
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
amaj Acetobacterium malicum subsp. dehalogenans
Pathway
amaj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
amaj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ACIUZZ_16200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amaj03400
]
ACIUZZ_16200
Enzymes [BR:
amaj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
ACIUZZ_16200
DNA repair and recombination proteins [BR:
amaj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
ACIUZZ_16200
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Zn_ribbon_IFT122
Motif
Other DBs
NCBI-ProteinID:
XOB57885
LinkDB
All DBs
Position
3474520..3475281
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AA seq
253 aa
AA seq
DB search
MKIISWNVNGIRAASQKGFLPFIEAATPDILCIQETKAHDHQLEDALLNIPGYSAYFHSG
EKKGYSGTAVYYKTEPLAIRTGLSNPVFNNEGRTIIMEYPDFILYNVYFPNGQKDDERLA
FKMDFNRCIQNDVQELLTAGKNVIVCGDINIAHREIDLKNPKENAKRSGFLPEERAWVDD
FLSIGMVDSWRVQHPEAIKYSWWSYRFNARANNAGWRIDSFFVSENFMSQVDSTDILDEV
MGSDHCPIVLTLK
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattatctcgtggaacgtcaacggcattcgggcggcctcccaaaaaggctttctg
ccctttattgaagcagccactccggatattctctgcattcaggaaaccaaggcccatgat
catcagctggaagatgctttactcaacatccccggctattcggcctattttcactccggc
gaaaaaaagggttatagcggtaccgccgtttattataaaaccgagcccctggctatccgc
accggtttatccaatccggtattcaataacgagggccgcaccattatcatggaataccct
gattttatcctttacaatgtctatttccccaacggccagaaagacgatgaacggcttgct
ttcaagatggacttcaatcgctgcattcaaaatgatgtccaggaactgctgacggctggt
aaaaacgtgattgtctgcggagatatcaacatcgctcatcgcgaaattgatttgaaaaac
cccaaggaaaacgccaaacgttccggttttttgccggaagaacgagcctgggttgatgat
ttcctcagcatcggcatggtcgacagctggcgggtgcaacatcccgaagcaatcaaatac
agctggtggtcttaccgcttcaacgcccgggccaacaacgccgggtggcggatcgactcc
ttctttgtgtctgaaaacttcatgtcccaggttgacagcactgatatcttagatgaggtg
atgggctcggatcattgcccgattgtcttaaccctgaaataa
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