Acetobacterium malicum subsp. dehalogenans: ACIUZZ_16350
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Entry
ACIUZZ_16350 CDS
T11223
Name
(GenBank) 3'-5' exoribonuclease YhaM family protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
amaj Acetobacterium malicum subsp. dehalogenans
Brite
KEGG Orthology (KO) [BR:
amaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amaj03019
]
ACIUZZ_16350
Messenger RNA biogenesis [BR:
amaj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ACIUZZ_16350
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Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
PUL
Motif
Other DBs
NCBI-ProteinID:
XOB57913
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All DBs
Position
complement(3503459..3504406)
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AA seq
315 aa
AA seq
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MKIKSVQKGQDYLGFLFIKSQMTKTATNGSRYFNMVLNDADFDEIDGKKWDVKPEDEEIF
TNGKLVKIKGKVQEFNNRLQLIVEKMRLVDETDEVSINDFIETVPVDIDEMLGYINDTID
DFSNADIAAITKKIFGDQTATLSYFPAAKKHHHAIKGGLLYHTYSMLRIGKGLVGIYPFI
NKDLLYAGIILHDIGKINEMVSDENGSVSDYTPEGKMLGHITQEIVELELVGQSLGTDPE
VLMMLKHMILSHHYQPEFGSPKRPMFPEAELLHHIDMIDARMYTMEQALNRVEPGSFTEP
NWSLDGISLYRRSFE
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaattaagtcagtacagaaaggtcaggattatcttggctttttatttataaagtcg
cagatgaccaaaacagccaccaatggcagccgttattttaacatggtgttgaacgatgcc
gattttgacgaaattgatggcaaaaaatgggacgtcaaaccggaagatgaggaaatcttc
accaatggcaaactggttaaaattaaaggtaaggtccaggaattcaacaaccgactgcag
ctgattgtcgaaaaaatgcggctggtcgatgaaaccgatgaggtgagcattaatgatttt
attgaaacggtaccagtagatatcgacgagatgctaggttacatcaatgatactatcgac
gattttagtaatgctgacatcgctgccatcactaaaaaaatatttggcgaccagaccgcg
accttgagttattttccggcggccaaaaagcatcatcatgccatcaagggcggactgctc
taccatacctattcgatgctgagaatcggcaaagggctggtggggatttaccccttcatt
aataaggatctgctctatgccggcatcattttgcacgatatcggcaaaatcaatgaaatg
gtctctgacgaaaacggatcagtttctgactataccccagagggcaaaatgctgggccac
atcacccaggaaattgtcgaactggaactggtgggtcagtcactgggtaccgaccccgag
gtgttgatgatgctcaaacatatgattctatcccatcattaccagccggaattcggcagt
cccaaacgaccgatgttcccggaagctgagctgctccaccatattgacatgatcgatgcc
cggatgtacaccatggaacaggccctgaaccgggtggaaccgggcagtttcaccgaaccc
aactggagtcttgacggcatcagtctgtatcgccgcagttttgaatag
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