Acetobacterium malicum subsp. dehalogenans: ACIUZZ_19050
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Entry
ACIUZZ_19050 CDS
T11223
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
amaj Acetobacterium malicum subsp. dehalogenans
Pathway
amaj03030
DNA replication
amaj03430
Mismatch repair
amaj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amaj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACIUZZ_19050 (holB)
03430 Mismatch repair
ACIUZZ_19050 (holB)
03440 Homologous recombination
ACIUZZ_19050 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amaj03032
]
ACIUZZ_19050 (holB)
03400 DNA repair and recombination proteins [BR:
amaj03400
]
ACIUZZ_19050 (holB)
Enzymes [BR:
amaj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ACIUZZ_19050 (holB)
DNA replication proteins [BR:
amaj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ACIUZZ_19050 (holB)
DNA repair and recombination proteins [BR:
amaj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ACIUZZ_19050 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
UBA
Motif
Other DBs
NCBI-ProteinID:
XOB58427
LinkDB
All DBs
Position
complement(4112036..4113022)
Genome browser
AA seq
328 aa
AA seq
DB search
MFEKIQGHQTITDHLEKEIKSSEVSHAYLFSGIDGIGKKKTAREFAKALLCQDQHDKGCG
HCPVCTQIDHENYPDVKIIGPKAGEASIKISQVREMISELSIKPYSGNWRINIIDGAERM
TPEAQNSLLKSLEEPLSYNIFILITSHPQTILPTIRSRCQSYHFQPLSIVDMEAIILREV
EFDRITVAEAIRASGGSPGMALYLLNNSEIQKERTHYLRELYSLLKGDEIKVFTLAEALS
KDKATSQEILEFFIHWFYEVNLLLEGHPLPDHGDPNPAHRAFHQLLENEKNQAIIKTLFE
MMATIQYNVNLRLQWEKCFIKIMKIQKG
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaaaagatacagggtcatcaaaccatcaccgatcatcttgaaaaagaaataaag
tccagcgaggtaagccatgcttaccttttttcaggaatcgatgggatcggaaaaaagaaa
accgcccgggaatttgccaaagcacttttatgtcaggatcagcacgacaaaggttgtggc
cattgtccggtctgtacccagattgatcatgaaaactatccggatgtcaaaattattggt
cctaaagcgggtgaagccagcattaagatcagccaggtacgggaaatgatcagtgagctg
tcgattaaaccctactccggaaattggcgcattaatattattgatggggccgaaagaatg
acgccagaggcccagaacagtctgttaaagtcgttggaagagccgctcagctataatatt
tttatccttatcaccagccatccgcagacaatcttaccgacgattcggtcgcggtgccag
agttatcatttccagccgctgagcattgtggatatggaagcgattattttacgggaagtc
gaatttgatagaattacggtggctgaggccatccgggcatctggcggatccccgggaatg
gccttatatctgctcaataacagcgagatccaaaaagaacgaacccattatctgagggag
ctgtacagcctcttaaaaggggatgagatcaaggtctttaccctggcagaagcgttatcc
aaggataaggcgaccagccaggagatcctggagttttttattcactggttttatgaggtt
aatctgctgctggaaggtcatcccctgcctgatcatggggacccgaatcccgcccaccgg
gccttccatcaattgctggaaaatgaaaaaaatcaggccattatcaaaactttatttgaa
atgatggcgacgatacaatataatgttaatttaagattacaatgggaaaagtgtttcatt
aagataatgaaaattcagaaaggataa
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