Akkermansia massiliensis: J5W79_01080
Help
Entry
J5W79_01080 CDS
T09439
Name
(GenBank) ABC transporter ATP-binding protein
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
amak
Akkermansia massiliensis
Pathway
amak02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
amak00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
J5W79_01080
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
amak02000
]
J5W79_01080
Enzymes [BR:
amak01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
J5W79_01080
Transporters [BR:
amak02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
J5W79_01080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_24
AAA_22
AAA
AAA_25
AAA_33
RseC_MucC
AAA_16
AAA_18
DO-GTPase2
KMPT-N
TsaE
AAA_29
Motif
Other DBs
NCBI-ProteinID:
QWP73483
LinkDB
All DBs
Position
complement(253836..255620)
Genome browser
AA seq
594 aa
AA seq
DB search
MLRQFFEYARYLKPVMKLFIAALAAGALAAAASGFGFPLMIAKVFPVVFDNTQIPPELQN
IIAHLVAPEHMHTAVLVAVCSLLPLVFAIRGIGTFFNVYWISIVSMKVLEEIRLDAFSKL
QTLPLSFIDRQKRGDLISRLINDAANVQGGLVIAANDIIKQPLTLLTALAFLVYKVFVDP
NTAVVLMNLGLVVLAIWPIRFFGRRVMKKAKQAQDELGNITAAAQENLAAQREIRSYGMQ
EQQVGLFLGLIQRFFKINLRTVKYRHFLVPVLEMVTALGLGILLVRGHEMGITKADFTAL
AAALFMCYDPLKRLGVTLTNLKSAHASLERINYLLKEPDTMPEAANPVPLGRASGRLDYD
GVSFSYDGARKVLDGIDVHISPGEVVGLVGPSGAGKTTFASLLPRFYDVSSGTLRMDGVD
VRDASLHDVRKNIAFVSQHPVLFHGTIMENIRLGRQDATDEEVMAAARAAAADGFIMGMP
DGYQTMLGDGGSGLSGGQRQRVAIARAFLKDAPVLILDEATASLDAESEAQIQQELDRLV
EGRTALIVAHRFSSIRVATRILVFEGGRIIGDGTHAELYASCPLYRELYDRQSL
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgttaagacagttttttgagtacgcgcggtatttgaagccggtgatgaagctgttcatc
gccgcgctggccgccggggcgctggccgccgccgccagcggtttcggcttcccgctgatg
attgccaaggtgttcccggtggtgtttgacaatacgcagattcccccggagcttcagaac
atcatcgcccatctggtggccccggagcacatgcacaccgctgtgctcgtggccgtatgt
tccctgctgccgctggtttttgccatccggggcataggcacgttcttcaatgtgtactgg
atcagcatcgtcagcatgaaggtgctggaggaaatcaggctggatgccttttccaaactg
caaacgctgcccctctccttcattgaccgccagaaacggggggacctgatcagccgcctc
attaatgacgcggccaacgtgcagggaggcttggtaatagcggccaatgacatcatcaaa
cagccccttaccctgctgaccgcactcgccttcctggtgtacaaggtctttgttgacccg
aacacggcggtggtgctgatgaatctggggctggttgtgctggcgatatggcccatccgc
ttctttggccgccgcgtgatgaagaaggccaagcaggcgcaggacgagctgggcaatatc
acggccgccgcccaggaaaacctggcggcccagcgtgaaatccgttcctacggcatgcag
gaacagcaggtggggcttttcctggggctgatccaacgcttcttcaagatcaatctgaga
acggtgaagtacaggcacttcctggtgccggtgctggaaatggtgacggcgctgggcctg
ggcattctgctggtgaggggccatgaaatgggaatcaccaaggctgacttcacggccctg
gccgcggccctgttcatgtgttacgaccccctcaagcgcctgggcgtgacgctgaccaac
ctgaaaagcgcgcatgcctccctggaacgcatcaactacctgctgaaggagccggacacc
atgccggaagccgccaatcccgttcccctggggcgagcctccgggcgtttggactatgac
ggcgtttccttctcctacgacggcgcacgcaaggtgctggacggcattgacgttcatatc
agccccggggaagtggtgggcctggtaggccccagcggcgccgggaaaaccacgtttgcc
agccttctgcccagattttacgacgtcagttccggcaccctgcgcatggacggcgtggat
gtgagagacgcctccctgcacgatgtgcgcaagaacattgccttcgtttcccagcatccc
gtgctcttccacggcaccatcatggaaaacatccggctggggcggcaggacgccacggat
gaggaagtgatggcggcggcgcgcgccgccgccgcagacggcttcatcatggggatgccg
gacggctaccagaccatgcttggcgacggaggcagcggcctgtccggcggccagcgccag
cgcgtggcgattgcccgcgccttcctgaaagacgcccccgtcctgattctggatgaagcc
accgcctccctggacgcggaaagcgaggcccagatccagcaggagctggaccgcctggtg
gagggaaggacggctctcatcgtagcccaccgcttcagctccatccgcgtggcgacgcgc
attctggtgtttgagggcggccgcatcatcggggacggcactcatgcggaactttatgcc
tcctgcccgctgtaccgggaattgtatgaccgccagtccctctag
DBGET
integrated database retrieval system
