Akkermansia massiliensis: J5W79_02385
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Entry
J5W79_02385 CDS
T09439
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
amak
Akkermansia massiliensis
Pathway
amak03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
amak00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
J5W79_02385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amak03019
]
J5W79_02385
03016 Transfer RNA biogenesis [BR:
amak03016
]
J5W79_02385
Enzymes [BR:
amak01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
J5W79_02385
Messenger RNA biogenesis [BR:
amak03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
J5W79_02385
Transfer RNA biogenesis [BR:
amak03016
]
Prokaryotic type
tRNA degradation factors
J5W79_02385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
KH_1
S1
PNPase
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
MatB
Motif
Other DBs
NCBI-ProteinID:
QWP73726
LinkDB
All DBs
Position
complement(566350..568494)
Genome browser
AA seq
714 aa
AA seq
DB search
MSIHSVECNVGTNPITIETGKMARLADGAVVVRSGDTVVLVTVVSATKVKEGQTFFPLSV
EYKEKAAAAGMFPGGYFKREGRPTEKEILTCRMTDRPLRPMFPKGYFYDTQVITLLLSAD
GENEPDILSINGASAACVVSDLPFAEPVGAVRVGRVDGQFIINPTNSQRENSQLDLVFAG
TKDQVIMIEGSANELPEEDFIAALRLAQENVKVLCEKQEELRAVCGKEKRSYELCLAKPE
LLEIGYEIAGDRIEDAIYAASKVERQKKVGALRDEVEAAIKERHPEATDFDVEQVFEYIQ
KKAFRISIMDKDKRADGRALKELRPLTAEINVLPSVVHGSAMFARGETMSLCLATLAPME
ERQYMDNYTGSVNEKRFILHYNFPPFSVGDTGRFGGQNRREIGHGALAERSIAPVVPDEQ
EFPYAIRISSEIMESNGSTSMASVCAGTMSLLAAGVPLKRPVAGISVGLVTEQNDQHEIT
TYKTLLDIIGSEDFYGDMDFKLCGTSEGVTGYQLDLKLPGIPLSILEEAIHVAKAGRTDV
LKVMNDAIAAPAQMSPNAPRIETTKIPADRIGELIGPGGKNIKAIQAESGADINIEEDGT
VHIYASKQEGLDRALELVTRMFKTIEIGELYTGKIVSTTTFGAFMEVLPGKDGLIHISEL
AEGRTAKTEDVVSVGDVVTAKCIGIDDKGRVKMSVRAALRDAKAAEAEAAGITE
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgagcatacattcagttgaatgcaacgttggtacgaatcccatcacgattgaaaccgga
aaaatggcccgtctggcagacggcgcggttgtcgtccgcagcggcgataccgtcgttctc
gtgaccgtggtgagcgccaccaaagtcaaggaaggccagaccttcttccccctgtccgtg
gaatacaaggaaaaggccgctgccgcgggcatgttccccggcggttacttcaagcgtgaa
ggccgccccacggaaaaggaaatcctgacgtgccgcatgacggaccgccccctgcgcccg
atgttccccaagggctacttctatgatacgcaggtgatcacccttctgctctccgccgac
ggtgaaaatgaaccggacattctgagcatcaacggcgcttccgccgcctgcgtcgtttcc
gacctcccctttgccgaacccgtgggcgccgtccgcgtgggccgcgttgacggccagttc
atcatcaacccgaccaattcccagcgtgaaaacagccagcttgacctggtgtttgccggg
acgaaggaccaggtgatcatgattgaaggttccgccaacgaactgccggaagaagacttc
atcgccgccctgcgcctggctcaggaaaacgtgaaggttctttgcgaaaagcaggaagag
ctccgcgccgtctgcggcaaggaaaagcgttcctacgaactctgccttgccaagccggaa
ctgctggaaatcggctatgaaattgccggtgaccgcattgaagacgccatctatgccgcc
tccaaggtggaacgccagaagaaggtgggagccctgcgcgacgaagtggaagccgccatc
aaggaacgccatccggaagctaccgattttgacgtggaacaggtctttgaatacattcag
aagaaggccttccgcatctccatcatggacaaggacaagcgcgccgacggccgcgccctc
aaggaactgcgccccctgaccgcggaaatcaacgtgctgccctccgtggtgcacggctcc
gcgatgtttgcccgcggtgaaaccatgtccctctgcctggcgacgctcgctccgatggaa
gaacgccagtacatggacaactacacgggcagcgtgaatgaaaagcgcttcatcctgcac
tacaacttcccgcccttctccgtaggtgacacaggccgtttcggcggtcagaaccgtcgt
gaaatcggccatggcgccctggcggaacgttccatcgctcccgtagtgccggacgaacag
gaattcccgtacgccatccgcatttcttctgaaatcatggaatccaacggttccacctcc
atggcctccgtctgcgcgggcacgatgtccctgctggcggccggcgtgcccctcaagcgc
cccgtggcgggcatttccgtgggcctggtgacggaacagaatgaccagcatgaaatcacc
acgtacaagacccttctggacatcatcggttccgaagacttctacggtgacatggacttc
aagctttgcggcacgtctgaaggcgtgacgggctaccagctggacctcaagctgcccggc
atccccctctccattctggaagaagccatccacgtggcgaaggccggacgcacggacgtg
ctgaaagtcatgaatgacgccattgcggctccggcccagatgagcccgaatgctccccgc
attgagaccaccaagattcccgccgaccgcattggcgagctgattggccccggcggcaag
aacatcaaggccatccaggctgaatccggcgccgacatcaacattgaggaagacggcacc
gtgcacatctacgcctccaagcaggaaggcctggaccgtgcgctggaactggttacccgc
atgttcaagaccattgaaatcggtgaactgtacaccggcaagatcgtttccacgaccacc
tttggcgcgttcatggaagtgcttcccggcaaggacggcctgattcacatctccgagctg
gccgaaggccgcaccgccaagacggaagacgtcgtcagcgtgggagacgtggtgactgcc
aagtgcatcggcatcgacgacaagggccgtgtgaagatgtccgtgcgcgccgctctgcgc
gacgccaaggcagccgaagcggaagccgccggcatcacggaataa
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