Akkermansia massiliensis: J5W79_02440
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Entry
J5W79_02440 CDS
T09439
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
amak
Akkermansia massiliensis
Brite
KEGG Orthology (KO) [BR:
amak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
amak03016
]
J5W79_02440 (truA)
Enzymes [BR:
amak01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
J5W79_02440 (truA)
Transfer RNA biogenesis [BR:
amak03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
J5W79_02440 (truA)
Prokaryotic type
J5W79_02440 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
QWP73737
LinkDB
All DBs
Position
583863..584654
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AA seq
263 aa
AA seq
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MPRIRFTTAYDGRPYLGWQSQPGGRTVQDALERAFSALFGSAVRIHGSGRTDAGVHALGQ
VFHVDAPDTHRIPADKWPTALNTRLPRTIRITQAEYVPPGFHARFSAAGKTYRYCISRAP
VLSPFDAGLAWHRPLAWSTDILEQAVRLFLGTHDFTAFAALRGNEPRPIPADYFLRTITQ
AQVVQEGEHVFITLTGTGFLYKMVRLMAGAAHEAARGKITLDELARLINYPRPDDKSPFC
APPDGLTLMQVHYAEEAPGNKQE
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgccccgcatccgtttcaccaccgcgtacgatggacgcccctacctgggctggcaaagc
cagccggggggccgcaccgtacaggacgccctggaacgcgccttttccgccctcttcggc
tccgccgtccgcatccacggctccggcaggacggatgccggcgtgcatgcgctgggccag
gtcttccatgtggatgcgccggacacccaccgcattcctgcggacaaatggcccaccgcc
ctcaatacccgcctgccccggaccatacggatcacccaggcggaatacgttcccccaggc
tttcacgcccggttcagcgcggcgggaaaaacctaccgctactgcatctcccgtgcgcct
gtcctcagcccttttgacgccgggctggcctggcaccgtccactggcctggagcacggac
attctggagcaagccgtccggctctttctgggaacgcatgactttacggcctttgcggcc
ctgcgcggcaatgaaccgcgccccatcccggcggactacttcctccgcaccatcacgcag
gcgcaggtggtgcaggagggggaacatgtcttcatcaccctcaccggaacgggctttctc
tataaaatggtgcgcctcatggcaggagccgctcatgaagccgcgcggggaaaaatcacg
ctggacgaactggcgcgcctcattaactacccacgcccggatgataaaagcccgttctgc
gccccgccggacgggctcacgctgatgcaggtccactacgcggaggaagcccccggaaac
aagcaggaatga
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