Akkermansia massiliensis: J5W79_05645
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Entry
J5W79_05645 CDS
T09439
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
amak
Akkermansia massiliensis
Brite
KEGG Orthology (KO) [BR:
amak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amak03032
]
J5W79_05645
03036 Chromosome and associated proteins [BR:
amak03036
]
J5W79_05645
03400 DNA repair and recombination proteins [BR:
amak03400
]
J5W79_05645
DNA replication proteins [BR:
amak03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
J5W79_05645
Chromosome and associated proteins [BR:
amak03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
J5W79_05645
DNA repair and recombination proteins [BR:
amak03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
J5W79_05645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-CCDC81_euk_2
DUF2267
Motif
Other DBs
NCBI-ProteinID:
QWP74344
LinkDB
All DBs
Position
complement(1335778..1336050)
Genome browser
AA seq
90 aa
AA seq
DB search
MNKTQFVRELQRELGDGVTPRQAERALNAVLDTIARSVLRRSLVKFRGFGSFSIKRRRAR
VVRHPENGSKLFVHESSTMKFRPSSRLWKK
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaacacaattcgtcagggaacttcagcgggagctgggagacggcgttaccccc
aggcaggcggaacgtgcgctgaacgcggtgctggacacgattgcccggtcggtcctgagg
cgctcactggtcaaattccgcggctttggttcgttcagcatcaagcggcggcgtgcccgc
gtggtacgccatccggaaaacggcagcaaactgtttgtgcatgaatcaagcaccatgaaa
ttccggccttcctcccgtttgtggaaaaagtag
DBGET
integrated database retrieval system
