Akkermansia massiliensis: J5W79_05955
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Entry
J5W79_05955 CDS
T09439
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
amak
Akkermansia massiliensis
Pathway
amak03030
DNA replication
amak03430
Mismatch repair
amak03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
J5W79_05955 (holA)
03430 Mismatch repair
J5W79_05955 (holA)
03440 Homologous recombination
J5W79_05955 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amak03032
]
J5W79_05955 (holA)
03400 DNA repair and recombination proteins [BR:
amak03400
]
J5W79_05955 (holA)
Enzymes [BR:
amak01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
J5W79_05955 (holA)
DNA replication proteins [BR:
amak03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
J5W79_05955 (holA)
DNA repair and recombination proteins [BR:
amak03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
J5W79_05955 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
DNA_pol3_gamma3
Transgly
Motif
Other DBs
NCBI-ProteinID:
QWP74397
LinkDB
All DBs
Position
complement(1418949..1420055)
Genome browser
AA seq
368 aa
AA seq
DB search
MGTSTLQQQAIHLVFGTDEGMVREKASGIFAALTEGTNEFSHEILEAACGDSDEADQVTR
QVMEALRTLPFFPGRKVVWMKNCNFLGDSVTGRSSTTEAALDSLRHLLEAGLGPDVLLLI
SATEFDKRRSFNKFLLQSAAAEELNKPDITKAGWEGSLMPLINKEAGARGMNFDSAALEL
FIHRVSESSRQIISEIEKLDLYLGADRRTVMPEDVERMVPLTRTGVIFEISRALENKKSD
AAISLIDFQLERGENAVTIMRAAFIPTLRNLLAARLLCDAFNLKPTNFKEFTARISSLPS
YAAALIPLKKDGTPNAYPLFLAAQNASKFKTERLKQTLKECMKADKALVSSSLDPRLILH
RLAICSAS
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgggtaccagcactttacaacaacaagccattcacctcgttttcggtacggacgaagga
atggtgcgtgaaaaggcttccggcatctttgccgccctgacggaaggcacgaatgaattt
tcccatgaaatcctggaagcggcctgcggcgattccgatgaagcggaccaggtgacgcgc
caggtcatggaagccctgcgcacgctgccgttttttccgggccgcaaggtggtctggatg
aagaactgcaattttctgggggattccgtcacggggcgttcctccaccacggaagcggct
ctggactctctcaggcatctgctggaagcggggctgggaccggacgtcctgctgctcatc
tccgccaccgaatttgacaagcgccgttcctttaacaaattcctgctacaatccgccgcc
gcggaggaactgaacaagccggacatcaccaaggccggctgggaaggcagcctgatgccc
cttatcaacaaggaggcaggcgcgcggggcatgaacttcgattccgccgctctggagtta
ttcattcaccgcgtcagcgaatcctcccgccagattatttccgaaattgaaaaactggat
ctttatctgggcgcggacaggcgcaccgtgatgccggaggatgtggagcgcatggttccg
ctgacgcgcacgggcgttatttttgaaatttcacgtgctctggaaaacaagaagagcgat
gcggccatctccctgattgactttcaactggaacgcggtgaaaacgccgtcacgatcatg
cgcgcagcgttcatccccacgctgagaaatctgctggccgccaggcttttatgtgatgcg
ttcaatctgaagcccaccaacttcaaggaatttacggcccgcatctcctccctgccctcc
tatgccgcggcactgattcccctgaaaaaagacggcactcccaatgcgtacccgcttttc
ctggcggcgcagaacgcttccaaattcaagacggaacggttgaagcagactttaaaggaa
tgcatgaaggcggacaaggccctggtatcttcttcgcttgatccgcggctgattctgcac
cgtcttgccatttgctccgcatcctga
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integrated database retrieval system
