Akkermansia massiliensis: J5W79_06020
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Entry
J5W79_06020 CDS
T09439
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
amak
Akkermansia massiliensis
Pathway
amak00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
amak00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
J5W79_06020 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
amak01007
]
J5W79_06020 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
amak03016
]
J5W79_06020 (lysS)
Enzymes [BR:
amak01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
J5W79_06020 (lysS)
Amino acid related enzymes [BR:
amak01007
]
Aminoacyl-tRNA synthetase
Class II (A)
J5W79_06020 (lysS)
Transfer RNA biogenesis [BR:
amak03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
J5W79_06020 (lysS)
Prokaryotic type
Other AARSs
J5W79_06020 (lysS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
QWP74410
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All DBs
Position
1443112..1444593
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AA seq
493 aa
AA seq
DB search
MSEQQQAHPNTTESELIAVRRDKLAKIRELGIDPYGARFDVTTTPAGLKADFQEDKQVAV
AGRLLAIRDMGKSQFFVIGDVRGKIQGFLHRNEVDETTWKLWKLLDRGDWIGIEGTTFLT
RTGEPTVKVSGLTILSKSLRPLPDKWHGLADKEVTYRKRHLDLISNEESASLFVTRSLMI
AEIRRFLQERGYLEVETPMLQDVAGGAAAKPFETYHNALDMPLTLRIAPELFLKRLMVGG
FTKIFELNRSFRNEGIDRRHNPEFTMLEAYCACGDFETMANMVEELICHLAEKFCGGLQI
DHKDAEGNVLYTIDLSRPWKRADYQDLIRAVAGQDWFDISPEARRARCEELDVEISPDMK
DVDVSQQVYEKLVEEKTMNPCFVTHVAKDLVPLAKLNKENPDVVDVYELVINGQEISPGY
SELNDPDVQKERLEHQAAGETQRVDYDFIETLEYGMPSAGGIGIGIDRVIMMLTGASSIR
DVLLFPQLKRKDS
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaacaacagcaggcacatccgaatacgacggaatccgaacttattgccgtgcgc
cgcgacaagctcgccaaaatccgcgagctggggattgatccctacggcgcaagatttgac
gtgaccactacccccgccggattgaaagccgatttccaggaagacaaacaggtagccgtg
gccggccgcctgctggctattcgcgacatgggcaaatcccagtttttcgtcattggagac
gtacgtggcaaaatccaggggttcctgcacaggaatgaagtggatgaaaccacctggaag
ctgtggaagctcctggaccgcggggactggatcggcattgaaggaaccaccttcctgacc
cgtaccggagaacccaccgtgaaggtctccggcctgaccattctttccaagagcctccgc
cccctgccggacaaatggcatggcctggcggacaaggaggtcacctaccgcaagcgccat
ctggacctcatttccaatgaggaaagcgcgtccctgttcgtcacgcgctccctcatgatt
gcggaaatccgccgctttctccaggaacgcggctatctggaagtggaaacccccatgctt
caggacgtggccgggggcgccgccgccaagccgtttgaaacgtaccataacgcgctggac
atgccgctgacgctgcgcattgctccggaactcttcctcaagcgactgatggtaggcggc
ttcaccaagatttttgaactcaaccgcagcttccgcaatgaaggcatcgaccgccgccac
aatccggaattcacgatgctggaagcctactgcgcctgcggcgattttgaaaccatggcg
aacatggtggaggaactcatctgccatctggcggaaaaattctgcggaggcctccagatt
gaccacaaggacgcggaaggcaacgtgctttacacgatcgacctcagccgcccctggaag
cgcgccgactaccaggacctgatccgcgccgtggccgggcaggactggtttgacatttct
cccgaggcgcgccgcgcccgctgtgaggagctggacgtggaaatcagcccggacatgaag
gatgtggacgtttcccagcaggtttatgaaaagctggtggaggaaaaaaccatgaatccc
tgcttcgtcacccatgtggccaaggacctggttcccctcgccaagctgaacaaagaaaac
ccggacgtggtggacgtgtatgaactggtgatcaacgggcaggaaatctcacccggctat
tcggaactgaacgacccggacgtgcagaaggaacgcctggaacaccaggccgccggggaa
acccagcgcgtggactacgacttcattgaaacgctggaatacggcatgccctccgcaggc
ggcatcggcatcggcattgaccgcgtcatcatgatgctgacgggcgcctcttccatccgc
gacgtcctgctcttcccgcaactgaaacggaaggacagttaa
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