Akkermansia massiliensis: J5W79_07030
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Entry
J5W79_07030 CDS
T09439
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
amak
Akkermansia massiliensis
Pathway
amak03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
J5W79_07030 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amak03400
]
J5W79_07030 (ruvB)
Enzymes [BR:
amak01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
J5W79_07030 (ruvB)
DNA repair and recombination proteins [BR:
amak03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
J5W79_07030 (ruvB)
RecFOR pathway proteins
J5W79_07030 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
AAA
RuvB_C
AAA_5
AAA_16
AAA_3
AAA_22
nSTAND3
Mg_chelatase
TIP49
AAA_18
AAA_14
NTPase_1
AAA_2
RNA_helicase
DUF815
TsaE
AAA_PrkA
MCM
AAA_28
Rad17
Sigma54_activ_2
NB-ARC
IstB_IS21
NACHT
NPHP3_N
bpMoxR
AAA_17
ABC_tran
AAA_24
Viral_helicase1
DNA_pol3_delta2
Parvo_NS1
Motif
Other DBs
NCBI-ProteinID:
QWP72123
LinkDB
All DBs
Position
complement(1681486..1682505)
Genome browser
AA seq
339 aa
AA seq
DB search
MGESFYTRTTETPPSAFDLSLRPPAFSEFRGQEKIKDRLMLMVEAAKQRDDVLDHILLSG
PPGLGKTTLANIIANAVGCRIHTTSGPQIEKAGDLAGVLTNLEKGDILFIDEIHRLHPAI
EEYLYPAMEDFRLDIIIDQGPNARSIQLNLPKFTLVGATTRAGMLTSPLRSRFGLVNRLD
YYTQEDLCAIIERSAGLLNVPVEPAGALQIALRSRGTPRVANSLLRWVRDYAQVRGDGVI
TEQLAHDALTMIEIDDDGLDEMDKRLLEAMIYKFNGGPVGLSSLAVAVGEDASTLEDVHE
PFLIMQGYINRTPRGRVAMPSAYLKMGATPPANGQGWLL
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgggagagtccttttacacacgcactacggagacacccccctccgcctttgatttgtcc
ctccgaccgcctgccttcagcgagttccgcgggcaggagaagatcaaggatcgcctgatg
ctgatggtggaagccgccaaacagcgcgacgacgtgctggaccacattctgctgagcggc
ccccctggcctggggaagacgacgcttgccaatattatcgcgaatgccgtcggctgccgc
atccatacgacgtccggcccccagatcgagaaggcgggggacctggcaggcgtgctgacc
aatctggaaaaaggggacatcctgtttattgacgagatccaccgcctgcatccggccatt
gaggagtacctgtacccggccatggaggatttccggctggatattattatcgaccagggc
ccgaacgcccgctccatccagctgaatcttcccaagttcaccctggtgggggccaccacc
cgcgccgggatgctgaccagcccgctgcgttcccgcttcggcctcgtgaaccggctggat
tattacacgcaggaggatttgtgcgcgatcatcgagcgatccgccggattgctgaacgtt
cccgtggaaccggcaggcgcgcttcagatcgccctgcgctcccgaggcacgccgcgcgtg
gccaattccctgctgcgctgggtgcgggattacgcccaggtacgcggcgacggcgtgatt
acggagcaactggcgcacgatgccctgaccatgatcgagattgacgacgacggcctggac
gagatggacaagcgcctgctggaagccatgatttacaagtttaacggcggtccggtgggc
ctgtcctccctggccgtggccgtgggggaagacgcttccacgctggaggacgtgcacgag
cctttcctgatcatgcaggggtacatcaaccgtactcccaggggacgcgtggcaatgcct
tccgcctatctcaagatgggggccacgccgcccgccaacggacagggatggctgttgtaa
DBGET
integrated database retrieval system
