Akkermansia massiliensis: J5W79_07380
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Entry
J5W79_07380 CDS
T09439
Name
(GenBank) HRDC domain-containing protein
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
amak
Akkermansia massiliensis
Brite
KEGG Orthology (KO) [BR:
amak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
amak03016
]
J5W79_07380
Enzymes [BR:
amak01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
J5W79_07380
Transfer RNA biogenesis [BR:
amak03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
J5W79_07380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
DUF3281
Motif
Other DBs
NCBI-ProteinID:
QWP72189
LinkDB
All DBs
Position
complement(1768136..1769194)
Genome browser
AA seq
352 aa
AA seq
DB search
MISEKEELLEWRKRATAQPTGRVVLDLEADSLHRYQEKICLIQYADETGSCLIDPLSIED
MGPFYNWLKETEVWMHGADYDMSLFQNAWETLPAMIWDTQTAARLLGFRQFGLAALVEHF
HGVALSKSSQKADWARRPLSPTMVTYALNDVNYMLDMADKLTAALREKGRMGWFEEICRH
SMDRARERHLAGHQDPWRIQGCGKLNRKGLAALRELWTWRDAEAKAWDKPAFMVCSNADL
IQWSLALQEQRTVTPPPRFHSHRRSRFMDALQKFYLLDEDDYPCRPRIQRRQHSDQFEAN
LARLCKLRDEKAEELGMEGSFLITRASLEAIAEDREKGVSTLLNWQKEALGF
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgattagcgagaaagaggaattactggaatggcgcaagcgcgccaccgcacagcccacg
ggacgggtagtcctggacctggaggcagacagcctgcaccgctatcaggaaaagatctgc
ctgatccagtacgcggatgaaacgggctcctgcctgatcgaccctctctccattgaagac
atggggccgttttacaactggctgaaggaaacggaagtctggatgcacggggcggattat
gacatgagcctcttccagaacgcctgggaaacgctgcccgccatgatctgggatacccag
acggcggcgcgcctgctgggcttccgccagttcgggctggccgccctggtggaacatttc
cacggcgtagccctgagcaagtcctcccaaaaggcggactgggcgcggcgccccctttcc
ccgaccatggtcacctatgccctgaacgacgtgaattacatgctggacatggcggacaaa
ctgacggccgccctccgggaaaaaggacgcatgggctggtttgaagagatttgcaggcac
tccatggaccgagcccgggaacgccatctggccggccatcaggacccctggcgcatccag
ggctgcggcaagctgaacaggaaagggctggccgccctccgggaactgtggacatggcgc
gatgcggaggctaaagcgtgggacaagcccgcgttcatggtctgctccaacgcggacctc
atccagtggagcctggcccttcaggaacagcgcaccgtgactcctccgccccgcttccac
tcccacaggcgcagccggttcatggacgccctccagaaattttacctgctggatgaagac
gactatccctgccgcccgcgcatccagcgccgccagcattccgaccagtttgaggccaat
ctggcgcgcctgtgcaagctcagggatgaaaaggctgaagaactgggcatggaaggctcc
ttcctgattacccgggcctccctggaagccattgcggaagacagggaaaaaggcgtctcc
accctgctgaactggcagaaggaagccctgggcttttaa
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