Akkermansia massiliensis: J5W79_08400
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Entry
J5W79_08400 CDS
T09439
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
amak
Akkermansia massiliensis
Pathway
amak03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
amak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
J5W79_08400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amak03400
]
J5W79_08400
DNA repair and recombination proteins [BR:
amak03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
J5W79_08400
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
J5W79_08400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_inter
SMC_N
AAA_21
nSTAND1
AAA_23
AAA_29
AAA_16
RsgA_GTPase
AAA_25
AAA_33
RNA12
DnaJ_CXXCXGXG
Guanylate_kin
DUF4350
Motif
Other DBs
NCBI-ProteinID:
QWP72380
LinkDB
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Position
complement(2013362..2015863)
Genome browser
AA seq
833 aa
AA seq
DB search
MNLPISIRGARQHNLRNLDLDLPSNKLIVFSGPSGSGKSSLAFDTLFSESRRRFLDCLSA
RARQGMEQPEKPEVDSITGLPPALCLEQSARQQSSRTLLGSITEILDYLRILYAAAGTPH
DPETGKELVRKSPDQITEELVSLPEQTRLVLAAPAEALLAQDPAATLGDFQRQGFLRVYW
NGEMQDIEEIGSPAPPPPDAALVIDRIIVRGENTASRLADSLQTALRINPDEVRAIITRP
GEETTVQAFHTRYRNPETGFLLPQLTPRHFSFNSPLGACPSCQGSGLNEREKGPCSACGG
LRLSPLALAVTMHTPDRAYNLAELTALPLEDMAGELERLKTPASLAAALDPLMKEINKRV
RFLNELGLSYLSLDRQANTLSGGELQRARLASQLGGGLSGVLYILDEPTAGLHPADTDRL
LRALRTLRDQGNTVLVVEHDEQILNAADHLVDMGPGSGTHGGRILAQGPLPEILENAESP
TGAWLSGKRSMPASGHRTVPTGHLVLAGADKHNLNNVTLNIPVGTLTCISGPSGSGKSTL
VRDCLIPAVRQDIPGKKGVPRRVQGSEHFNRLVVIDQSPIGRTPRSTPATATGLLQVLRP
LYAQLPLSKQRGYTAARFSPNIRGGRCERCLGTGMIEVDMNFLGNVTMPCDACQGQCYNR
ETLEVTWKGKSIAQALALTVDEAAEFFSSLPRAAAILKSMQDVGLGYLSLNRRADTLSGG
ESQRIKIAAELAKAPAWKLAEDGKRALFILDEPTSGLHFNEVALLLTALFRLRDAGHTIL
CVEHHKDLLNAADYLVDMGPGAGRHGGNIVAEGTPAAVAAMPEAPTAPWLLAR
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atgaaccttcccatctccatccgcggcgcacgccagcacaacctccggaacctggacctg
gaccttccgtccaacaagctgatcgtgttcagcggcccttccggctccggaaaatcctcc
ctggcgttcgacacgcttttctccgaatcccgcaggcgtttcctggattgtctttcggca
cgggccaggcagggcatggaacagccggaaaagccggaggtggacagcatcaccggactg
cccccggccctgtgcctggaacaatccgccaggcagcagagttctcgcaccctgctgggg
agcatcacggaaattctggactacctgcgcatcctgtatgcggctgccggcactccccat
gacccggaaacgggcaaggaactggtgcgcaaaagcccggaccagattacggaggaactc
gtctccctgccggaacagacgcgcctggtcctggccgctccggcggaagccctgctggcc
caggatcctgcggcgactctgggcgacttccagcgccagggctttctgcgggtctattgg
aacggggaaatgcaggatattgaggaaataggctccccggctcctcccccgccggatgcc
gccctggtcatcgaccgcatcatcgtccgcggggaaaacacggcctcccgcctggcggac
tccctccaaacggccctccggatcaatccggacgaggtgcgggccatcatcaccaggccg
ggggaagaaactaccgtccaggccttccatacccgctaccgcaacccggaaacgggcttc
ctgcttccccagcttacgccccgccatttctccttcaactctccactgggcgcgtgccct
tcctgccagggctccggcctgaatgagcgggaaaaaggcccatgctccgcctgcggcggc
ctgcggctctcccccctggcgctggccgtcaccatgcacacgccggaccgcgcctataac
ctggcggaactgacggctctaccgctggaagacatggccggagagctggaacggctgaag
acgcccgcctccctggcggcggcgctggacccgctcatgaaggagatcaacaagcgcgtg
cgcttcctgaacgaactgggcctttcctacctctccctggaccggcaggcaaacactctt
tccggcggggaactgcaaagggcgcgcctggcctcccagctgggcggcggtctttccggg
gtcctttacatcctggacgaacctactgccggacttcaccccgccgatacggaccgcctg
ctccgcgcgctccggacgctccgggaccagggcaacacggtcctggtagtggagcacgac
gaacaaattctgaacgcggcggaccatctggtggacatgggccccggctccggcacccac
ggcggccgtattctggcgcaaggtccccttccggaaattctggaaaacgccgagagccct
accggagcatggctctccggcaaacggagcatgcccgcctccggacacaggacggttccc
accgggcatctggtcctggccggggcggacaagcacaacctcaacaacgtcaccctgaac
atcccggtaggcacgctgacctgcatctccgggccctccggttccggaaaatccactctt
gtccgggactgcctcattcccgcggtcaggcaggacatccccgggaaaaagggcgttccg
cgccgcgtgcagggctcggaacacttcaaccgcctcgtcgtcatcgaccagtcgcccatc
ggcaggacgccgcgctccacgccggccacagccaccggactgctccaggttctgcgcccc
ctttacgcccagctccctctttccaagcaaaggggatacacggcggcgcgcttttccccc
aacatccgcggggggcgctgcgaacggtgcctgggcacgggcatgattgaagtggacatg
aactttctgggcaacgtcacgatgccctgcgacgcctgccagggccagtgctacaaccgg
gaaacgctggaagtcacctggaagggaaaatccatcgcccaggcgctggcgctgacggtg
gatgaagcggcggaattcttctcctccctgccccgggccgccgctatcctgaaaagcatg
caggacgtaggcctgggatacctcagcctcaaccgccgggcagacaccctctccggcggg
gaatcccagcgcatcaaaatagccgcggagctggccaaggccccggcctggaaactggcg
gaggacggcaagcgcgccctcttcattcttgacgaacctaccagcggcctccacttcaat
gaagtggcccttcttctgacggctcttttccgtctgagggacgccgggcacaccatcctc
tgcgtggaacaccacaaggacctgctgaacgccgcggactacctggttgacatgggcccc
ggagccggaagacatggcggaaacatcgtggcggaaggaacgcccgccgccgtagcagcc
atgccggaagcccccacggcgccgtggcttctcgcccgttaa
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