Akkermansia massiliensis: J5W79_10125
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Entry
J5W79_10125 CDS
T09439
Symbol
sucD
Name
(GenBank) succinate--CoA ligase subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
amak
Akkermansia massiliensis
Pathway
amak00020
Citrate cycle (TCA cycle)
amak00640
Propanoate metabolism
amak00660
C5-Branched dibasic acid metabolism
amak00720
Other carbon fixation pathways
amak01100
Metabolic pathways
amak01110
Biosynthesis of secondary metabolites
amak01120
Microbial metabolism in diverse environments
amak01200
Carbon metabolism
Module
amak_M00009
Citrate cycle (TCA cycle, Krebs cycle)
amak_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
amak00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
J5W79_10125 (sucD)
00640 Propanoate metabolism
J5W79_10125 (sucD)
00660 C5-Branched dibasic acid metabolism
J5W79_10125 (sucD)
09102 Energy metabolism
00720 Other carbon fixation pathways
J5W79_10125 (sucD)
Enzymes [BR:
amak01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
J5W79_10125 (sucD)
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Ortholog
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GFIT
Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
KARI_N
GFO_IDH_MocA
Ribul_P_3_epim
Motif
Other DBs
NCBI-ProteinID:
QWP72705
LinkDB
All DBs
Position
complement(2427978..2428865)
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AA seq
295 aa
AA seq
DB search
MTSLIDKNTRLVVQGITGSAGAFHAKNCMDFGTNVVAGVTPGKGGQLFEGKVPVFDTVAE
AKKATDCNASMIFVPPPFAADAIMEAADAGVKLIVCITEGIPVQDMQKVKAFLKDKDVTL
IGPNCPGIVNPAANCKIGIMPAYIFKPGRIGIVSRSGTLTYEAVWQVTNMGLGQSMCIGI
GGDPVHGMTQQQAVQFFTEDPNTDAFIMIGEIGGSEEEEAAEWIRNNCKKPVAAFIAGAT
APKGRRMGHAGAIVAGGKGTAAAKQEALKEAGIVVAKTPAQMGAALAEAMKNKGM
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgacatctctcattgacaaaaacacccgtctggttgtgcaaggcatcaccggcagcgcc
ggcgcgttccacgccaaaaactgcatggacttcggcaccaacgtggtcgccggcgtgacc
cccggcaagggcggccagctctttgaaggcaaggtccccgtcttcgacaccgtggcggaa
gccaaaaaagccacggactgcaacgcctccatgatctttgtgccgccgcccttcgccgcg
gacgccattatggaagccgctgacgctggcgtaaagctcatcgtctgcatcacggaaggc
atcccggtgcaggacatgcagaaggtgaaagccttcctgaaggacaaggacgtgaccctc
atcggcccgaactgccccggcatcgtcaacccggccgccaactgcaagatcggcatcatg
ccggcctacatcttcaagcccggcagaatcggcatcgtctcccgttccggcacgctcacc
tatgaagccgtctggcaggtcaccaacatgggcctgggccagagcatgtgcatcggcatc
ggcggcgaccccgtccacggcatgacccagcagcaggccgttcaattcttcacggaagac
cccaacacggacgccttcatcatgatcggtgaaatcggcggttcggaagaagaagaagcc
gccgaatggatcaggaacaactgcaaaaagcccgtcgccgccttcatcgcaggagccacg
gctcccaagggacgccgcatgggccacgcaggcgccatcgtggccggaggcaaaggcacc
gccgccgccaagcaggaagccctgaaggaagccggcatcgtggtcgccaagacgcccgcc
cagatgggcgccgctctggcggaagccatgaaaaacaagggaatgtaa
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