KEGG   Akkermansia massiliensis: J5W79_11435
Entry
J5W79_11435       CDS       T09439                                 
Name
(GenBank) HU family DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
amak  Akkermansia massiliensis
Brite
KEGG Orthology (KO) [BR:amak00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:amak03032]
    J5W79_11435
   03036 Chromosome and associated proteins [BR:amak03036]
    J5W79_11435
   03400 DNA repair and recombination proteins [BR:amak03400]
    J5W79_11435
DNA replication proteins [BR:amak03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    J5W79_11435
Chromosome and associated proteins [BR:amak03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    J5W79_11435
DNA repair and recombination proteins [BR:amak03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      J5W79_11435
SSDB
Motif
Pfam: Bac_DNA_binding DUF2090 HU-HIG HU-CCDC81_bac_2 Arm-DNA-bind_4
Other DBs
NCBI-ProteinID: QWP72949
LinkDB
Position
complement(2759240..2759509)
AA seq 89 aa
MNKAQLIELIQNKLGADTTKKHAEEALAAVLESIKEGVQESGKVQIIGFGTFATKTREAR
TGRNPKTGKAINIPASKTVAFKASSALKD
NT seq 270 nt   +upstreamnt  +downstreamnt
atgaacaaggctcaactgatcgaattgattcaaaacaagctgggtgccgatacgaccaag
aagcacgctgaagaagctctggccgctgtgctggaatccatcaaggaaggcgtgcaggaa
tccggcaaggtgcagatcatcggctttggtacgtttgctaccaagacccgtgaagcccgt
accggccgcaacccgaagaccggcaaggcgatcaacattcccgcctccaagacggttgct
ttcaaggcctcttccgccctgaaggactaa

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