Akkermansia massiliensis: J5W79_11435
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Entry
J5W79_11435 CDS
T09439
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
amak
Akkermansia massiliensis
Brite
KEGG Orthology (KO) [BR:
amak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amak03032
]
J5W79_11435
03036 Chromosome and associated proteins [BR:
amak03036
]
J5W79_11435
03400 DNA repair and recombination proteins [BR:
amak03400
]
J5W79_11435
DNA replication proteins [BR:
amak03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
J5W79_11435
Chromosome and associated proteins [BR:
amak03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
J5W79_11435
DNA repair and recombination proteins [BR:
amak03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
J5W79_11435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
DUF2090
HU-HIG
HU-CCDC81_bac_2
Arm-DNA-bind_4
Motif
Other DBs
NCBI-ProteinID:
QWP72949
LinkDB
All DBs
Position
complement(2759240..2759509)
Genome browser
AA seq
89 aa
AA seq
DB search
MNKAQLIELIQNKLGADTTKKHAEEALAAVLESIKEGVQESGKVQIIGFGTFATKTREAR
TGRNPKTGKAINIPASKTVAFKASSALKD
NT seq
270 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaggctcaactgatcgaattgattcaaaacaagctgggtgccgatacgaccaag
aagcacgctgaagaagctctggccgctgtgctggaatccatcaaggaaggcgtgcaggaa
tccggcaaggtgcagatcatcggctttggtacgtttgctaccaagacccgtgaagcccgt
accggccgcaacccgaagaccggcaaggcgatcaacattcccgcctccaagacggttgct
ttcaaggcctcttccgccctgaaggactaa
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