KEGG   Alteromonas mediterranea U4: I607_01105
Entry
I607_01105        CDS       T02720                                 
Name
(GenBank) single-strand binding protein
  KO
K03111  single-strand DNA-binding protein
Organism
amal  Alteromonas mediterranea U4
Pathway
amal03030  DNA replication
amal03430  Mismatch repair
amal03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:amal00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    I607_01105
   03430 Mismatch repair
    I607_01105
   03440 Homologous recombination
    I607_01105
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:amal03032]
    I607_01105
   03400 DNA repair and recombination proteins [BR:amal03400]
    I607_01105
   03029 Mitochondrial biogenesis [BR:amal03029]
    I607_01105
DNA replication proteins [BR:amal03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    I607_01105
DNA repair and recombination proteins [BR:amal03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Other MMR factors
     I607_01105
  TLS (translesion DNA synthesis) factors
   Other SOS response factors
    I607_01105
Mitochondrial biogenesis [BR:amal03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial DNA replication factors
   Other Mitochondrial DNA replication factors
    I607_01105
SSDB
Motif
Pfam: SSB OSB_SSB Lyase_8_N DUF3127 tRNA_anti-codon YorF
Other DBs
NCBI-ProteinID: AGP84033
LinkDB
Position
246162..246752
AA seq 196 aa
MATKGVNKVILVGNLGNDPEVRYMPNGNAVANLSLATSESWKDQQGQVQERTEWHRLTMY
RRLAEIAGEYLKKGSQIYVEGKLQTRKWQDQQGQDKYTTEIIVDQMQMLGGRGGDGGGGN
GGYQRPQNNQGGYNQAPAQGGYNQAPQQGGGQQGGYNQSQGQGGGYNQAPQGGNPSQPKT
PPMAEPDFDFDDDIPF
NT seq 591 nt   +upstreamnt  +downstreamnt
atggcaacgaaaggcgttaataaggttattcttgttggaaaccttggcaatgatcctgaa
gttagatacatgcctaacggaaacgccgttgcgaacttaagcctagcaactagcgaaagc
tggaaagaccaacagggtcaggttcaagagcgcactgagtggcaccgccttacaatgtac
cgtcgcttagcagaaattgccggagagtacctgaaaaagggctcgcaaatttacgtagaa
ggtaaattgcaaacgcgtaagtggcaagatcagcaaggtcaggataagtacaccactgaa
attatcgtagatcaaatgcaaatgcttggcggtcgcggcggtgatggtggcggcggaaac
ggcggttaccagcgtcctcaaaacaaccaaggcggttataatcaagcgccagcgcaaggt
ggttacaaccaggctccacaacaaggtggaggccagcaaggcggctataaccagagccag
ggccaaggcggtggttataatcaagcgccgcagggtggtaacccgtcacagcctaagact
ccgcctatggctgaaccagacttcgattttgacgacgatattccgttctag

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