Alteromonas mediterranea U4: I607_03625
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Entry
I607_03625 CDS
T02720
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
amal
Alteromonas mediterranea U4
Pathway
amal03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
I607_03625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amal03400
]
I607_03625
DNA repair and recombination proteins [BR:
amal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
I607_03625
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
I607_03625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_N
RecO_C
Motif
Other DBs
NCBI-ProteinID:
AGP84535
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All DBs
Position
816761..817465
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AA seq
234 aa
AA seq
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MNNEWLNAYVLHRRPYRETSYIVDFFSLEEGRISAVAKGVKNSKSDKKSLLQPFQHLRLQ
LSGKSDLKNLRHVESVAPSISLTGTALFCAMYVNELTNRIMPQGLASDGVYSAYEAALLA
LRDEADIEVTLRQLEFALLDEMGLLPDFTSDVEYEMPIEENGRYHFQLDAGFIQISDDVV
GARGIPGTALLSLSQGEFTPLSKKVAKVLCRDLLKPLIGDKPLKSRELFMTKPR
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgaataacgaatggttaaacgcctatgtattgcatagacgcccttacagggagaccagc
tatattgttgattttttctcgttagaagaaggccgtataagtgccgtcgcaaagggggta
aaaaacagcaagtctgataaaaagagcctgcttcaaccctttcagcatttgcgtctgcag
ctaagtggtaaatctgatttaaaaaatttacgtcacgtggaaagtgtagcgccgtcaatt
tccctcactggcaccgctttattttgtgcaatgtatgtcaatgagttgaccaatagaata
atgccccaggggctagccagtgatggagtatatagcgcctatgaagctgcgcttttggcg
ttgcgagatgaagctgacattgaagtgacgttacggcagctagagtttgctcttcttgat
gaaatggggttgcttcctgatttcaccagtgatgttgaatacgaaatgcctattgaagaa
aacggtcgctatcactttcagctagacgccggttttatacagatttccgatgatgtagta
ggggctagaggaattcccggtacggcattacttagcctatctcagggggaattcacacca
ttgagcaaaaaggtcgcaaaggtactgtgtcgcgatttactcaagccgctgattggggac
aagccgttaaaaagtcgagagctctttatgactaaaccgcgctaa
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