Alteromonas mediterranea U4: I607_04060
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Entry
I607_04060 CDS
T02720
Name
(GenBank) LysR family transcriptional regulator
KO
K04761
LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
Organism
amal
Alteromonas mediterranea U4
Brite
KEGG Orthology (KO) [BR:
amal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amal03000
]
I607_04060
Transcription factors [BR:
amal03000
]
Prokaryotic type
Helix-turn-helix
LysR family
I607_04060
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HVO_A0261_N
HTH_36
Motif
Other DBs
NCBI-ProteinID:
AGP84620
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Position
910928..911836
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AA seq
302 aa
AA seq
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MKWPNLKHLHYLVTLHQEQHFHRAAQRCNVSQSTLSTAIQNLEEHFGSQLLEREHKTFVF
TSLGLDIVERSKVLLQEAGELVEYAQNAGNWQRGTLKLGVIPTIAPFLFEGMMGAFSAFL
PEINLEMQEDTTEKLLQQLTDGRLDLLILALPMETPGCKQMVLGHDPFHLIAHKDMAEQL
PSPVDISGLPKKSIFLLQQEHCMTGHAVSACNLQHSDQISSVAASSLYTLVQLANSKMGY
TFLPELAINQSILEHTGLKSFPAEEQGFREIGLVWRSGTTRMQLFRRIGEIISPLLPIPT
LK
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgaaatggccaaatcttaagcacctacactatttggtgacgcttcaccaagagcaacac
ttccaccgcgctgctcagcgttgtaatgtaagtcagtcaacattaagtacggccattcaa
aatttagaagagcattttggtagtcaattacttgagcgtgaacacaagacctttgttttt
acttcattaggcttagatattgttgagcgcagtaaagtgctgctgcaagaagcgggggaa
ttggtcgagtatgctcaaaatgcgggcaactggcagcgtggaacgcttaagcttggtgtt
ataccaacaatagcgccgtttctttttgaaggaatgatgggggccttctcagccttcctt
cctgaaattaatttagaaatgcaggaagataccactgaaaagctcttacaacagttaaca
gacggtaggttagatttactaattttagcgcttccaatggaaaccccagggtgtaagcag
atggtattgggccacgaccccttccatcttatagcgcacaaagatatggcggaacaactg
cctagtcccgtagatatttcaggtttaccgaaaaagagtatttttctgcttcagcaagaa
cattgtatgacggggcatgcggtgagcgcgtgtaatcttcagcatagtgatcaaattagc
agtgttgcagcaagtagcctatataccttggtgcagctggcaaatagtaaaatgggctat
accttcttaccggaacttgcgataaaccagtctattcttgagcacactggtctaaaaagt
tttccagcagaagagcagggctttcgagaaattggtttggtatggcgctcaggcacaacc
cgtatgcagctattccgtcgaattggtgaaattatctcgccactactgcctatacccacg
ctgaaatag
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