Alteromonas mediterranea U4: I607_05310
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Entry
I607_05310 CDS
T02720
Name
(GenBank) sigma-54 depedent transcriptional activator PspF
KO
K03974
psp operon transcriptional activator
Organism
amal
Alteromonas mediterranea U4
Brite
KEGG Orthology (KO) [BR:
amal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amal03000
]
I607_05310
Transcription factors [BR:
amal03000
]
Prokaryotic type
Other transcription factors
Others
I607_05310
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GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
Mg_chelatase
AAA_5
HTH_8
AAA_2
AAA
bpMoxR
AAA_16
AAA_7
Motif
Other DBs
NCBI-ProteinID:
AGP84866
LinkDB
All DBs
Position
complement(1176603..1177724)
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AA seq
373 aa
AA seq
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MSRYRQQDNLLGQANSFLEVLEQISQIAPLDKPVLVIGERGTGKELIAARLHFLSKRWDQ
NYIKLNCAALNESLLESELFGYEAGAFTGASKRREGRFEVAHNGTLFLDELANTSGLIQE
KLLRVVEYGEFERVGGSKSVKTDVRLIAATNEDLPALADAGEFRADLLDRLAFDVITIPP
LRERREDIMMLAENFAINMAREMEMELFSGFTEKAKRTLLDYDWPGNIRELKNVVERAVY
RTNNPHLPVHEIILDPFESVYRPQGRVKTKDRVSTSESASPIVSSQPDHTKDVIESADIT
PLTPSNQQESVEYPIDLKERSQQYEIDMIKEALADSQFNQKKTAEKLSLTYHQLRGYLKK
YNLLDSSAESVEA
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgagtaggtatcgtcagcaagacaatttgctaggtcaagcgaacagttttctagaagtg
ctagagcaaatttcacaaatagcaccgttagataaaccggtccttgtgataggagagcga
ggtacaggtaaagaactgattgcagcgcgtcttcacttcttatctaagcgctgggaccaa
aactatatcaagctgaattgcgcagccctaaatgaaagccttttagaaagtgagcttttc
ggttacgaagccggggcatttaccggtgcatcgaaacggcgagaaggtcgttttgaagtc
gcccataacggcacactgtttctcgatgaacttgccaatacttcgggtctaattcaagaa
aagctccttcgcgttgtcgaatatggggagtttgaacgcgtgggcggcagtaaatcagtg
aaaaccgatgtaaggcttattgcagcgacaaatgaagatctccctgcccttgccgatgca
ggcgagtttcgcgccgacttgctagataggctagccttcgatgtgattaccatccccccg
cttcgagagcgacgggaagatatcatgatgttagcggaaaattttgccattaatatggcc
cgtgagatggagatggagctctttagcggcttcactgaaaaagccaagcgtactctgctt
gattacgattggcccggaaatattcgagaactgaaaaatgtagttgagcgcgccgtttac
cgcactaacaaccctcacctaccggttcacgagatcattcttgacccctttgaatccgtt
tatcgtccacagggtagagttaagactaaggatagagtaagcacttctgagtcagcaagt
cctatcgtgtcctcacaacccgaccatacaaaagatgtgatagaaagcgctgacattacg
cctttaacgccaagcaatcagcaagaatctgtcgaatatcccatagatttgaaagaacgc
tctcaacaatatgagatagatatgataaaagaggcacttgctgacagtcagtttaatcaa
aagaaaaccgctgaaaaattgagcctgacatatcatcagctgcgtggctatctcaaaaaa
tataacttactagattcttccgctgaaagcgtcgaggcgtaa
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