Alteromonas mediterranea U4: I607_05725
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Entry
I607_05725 CDS
T02720
Name
(GenBank) TonB-dependent outer membrane receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
amal
Alteromonas mediterranea U4
Brite
KEGG Orthology (KO) [BR:
amal00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
amal02000
]
I607_05725
Transporters [BR:
amal02000
]
Other transporters
Pores ion channels [TC:
1
]
I607_05725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
STN
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AGP84949
LinkDB
All DBs
Position
1268730..1271666
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AA seq
978 aa
AA seq
DB search
MFRLVKAPLHIAPTLFLLLTHAPLVYAQTTQVTATQPQTSINEFSFSIPAQNANEALTEL
AKQANTTLLFPFDLAKKVKTNALEGTFTLNEALSQLLKDTELAVVVDEAGMLSIRSRSSL
LAKANQANKEEKASEEGNNGLEKIAVVGTRNAPRSAVDSPVPLDVIGSKALRSQGNSDVL
SMLSVMVPSLNVNDQPINDASSLVRPANLRGMSSDHTLLLLNGKRRHRSAVITFLGGGLS
DGAQGPDISIIPAYALKQVEVLRDGASAQYGSDAIAGVINFVLKDAREGGSVALKLGGYS
EGDGELFQIQLNNGFAIGDKGFLNATAEYRQQNGTSRSVQRSDAQALIEQGNTFIQTPSQ
VWGALDVNEDIKLALNAGTAISQMTEFYSFATAARRKITGGFYFRNPQTREGVFSRTDPN
TGKSRLIVADLDGLENGIACPSITLSTNNVLQDPDYQRIADNTTELGANCFAFNEWFPGG
FTPKFGGTITDASLAMGIRHELPKGWAMDASATLGYSDIEYTISNTVNPSLGPQTPTSFS
PGGVSQVERTLNLDFSKLIQSIFEDPISIGLGAEWRKETYFQKAGDEASYIAGPFALEPP
LGLSEGFSIGSNGFPGYQPQSAGHWSRNNWALYADVELFLTEAMQVGLAARVEHFSDFGS
TFDGKLSMRYKLNDTFALRGSVNTGFKAPTVGQSNVINVTTAYGVNGLEDQATLPPTDLI
SLQLGATPLTPEESVNFSLGMVMQASDNFFATLDYFNIRLSDRISTTSAIPLTEQDISAL
VAQGRPDAVKYNAAKYFTNDFDTKTQGVDLVVNYSFSYNDWANALLLAYNWTDTQVERLT
LYPALVNDEIQLLPNLTPSRIRMLEDNLPAHRGSVTLEQVKDNWALTWRLNYYGEFYEDH
LDASAGMDIYGSASTTFDAQLAWKVQPHIQLTLGAQNLFDALPDENPFQGEVGALYPPTS
PGGINGAFYYAGIEYTFN
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgcttagtaaaagcgcctctgcacattgcgcctactttatttttgcttcttaca
catgcccctcttgtgtacgcacaaaccactcaagttacagccacacaaccacaaacatca
attaacgagtttagtttttcgattcctgcgcaaaatgccaacgaggcccttacggagctt
gcaaaacaggccaataccactttgttatttccgtttgatttagctaaaaaagtgaaaacg
aatgcacttgaaggcacgtttacgcttaacgaagccttgtctcaacttttaaaagatacg
gaacttgccgttgttgtggatgaagcgggtatgctgagtattcgctcccgctcgtcgtta
ctagcgaaggctaaccaggcgaacaaggaagaaaaagcgtcagaagagggcaataatggc
ttggaaaaaattgcggtagttggcaccagaaatgcgccgcgaagtgcagtagactctccg
gttccccttgatgttattggttcgaaggcgctgcgttcgcaagggaatagtgacgtgctt
tctatgcttagcgtgatggtgccgtcattaaatgttaatgaccagccgattaacgatgcc
agtagccttgtaagacctgcgaatttaagaggcatgtcgtcagatcacacgttgttatta
cttaacgggaagcgtagacaccgatctgcggttattacctttctcggcggtggcctgtct
gacggtgcacaagggcctgatatatcaattatacctgcttatgcgttaaagcaagttgag
gtgctgcgagatggtgcatccgcacaatatggttccgatgctatcgcaggcgttattaac
tttgtgctaaaagatgcgcgagaaggggggagcgttgcccttaagttaggtgggtacagt
gaaggtgatggcgagctttttcaaatacagcttaacaacgggtttgccataggcgataaa
ggctttttaaatgcaacggctgagtacaggcagcaaaacggcacctctcgttctgtacaa
cgcagtgatgcacaggcgcttatcgaacaaggtaatacatttatccaaacgccgtctcaa
gtttggggcgcattagacgttaacgaagatatcaaactagccttaaatgccggcactgct
atttctcaaatgacagaattttatagttttgctacagcagctagacggaaaataaccggt
ggtttctatttccgaaacccgcaaactcgagaaggcgtgtttagccgaactgaccccaac
acggggaaaagccgtttaattgtggcggatttagatggattggaaaacggcatagcgtgc
ccgtctattacgctttctactaacaacgtattgcaagaccctgattatcagcgaatagct
gataacaccaccgaacttggggcaaattgttttgcttttaatgagtggtttccaggcggt
ttcacgccaaaatttggcggcaccattaccgatgcctcgctggccatgggaataagacat
gaattgcccaaaggctgggcgatggatgcgagtgccactttaggttacagtgatatcgag
tacaccatatcgaatacggtaaacccgtcgttagggccccagacacccacttccttttcg
ccaggcggcgtatcacaagtagagcgaacccttaacctcgattttagcaagcttattcaa
tccatttttgaagacccaattagcataggcctcggtgctgaatggcgcaaagaaacctat
ttccagaaagccggtgatgaagcgtcctacattgctgggccttttgcccttgagcctccg
ttggggttaagcgaaggcttttcgattgggtcgaacggttttccagggtatcagcctcag
tcagctgggcattggagccgcaataactgggcattgtacgccgacgtagagctgttccta
actgaagcgatgcaggttggactggctgctagagttgagcattttagtgactttggctct
acctttgacggcaaattgagcatgcgttataaacttaacgacacctttgcattgcgaggg
tcagttaatacaggcttcaaagccccgacagtgggccagagcaacgtgattaatgtaaca
actgcttatggcgttaatgggcttgaagaccaagccaccttgccgccaacggacctcatt
tcattacagctcggcgcgacaccacttacaccagaagaatcggtcaatttcagtctgggc
atggtcatgcaggcaagcgacaactttttcgcaacgctcgactatttcaatattcgcctc
tcagatcgcatcagtaccacctcagcgattccgttgactgaacaagatattagcgcgttg
gttgcacagggaaggccagatgcagttaagtacaatgcagcaaaatactttactaatgat
tttgacactaagacccagggcgtagatttagttgtaaactacagcttttcatacaatgac
tgggctaacgcgttattactcgcttacaactggacagatacgcaggtggaacgccttacg
ctttatcctgcactagttaacgatgaaatacagcttttgcctaacttaacgccgtcgcgc
attcgtatgctagaagataacctcccggctcacaggggaagcgttacccttgagcaagtc
aaagataactgggcgctaacatggcgattaaactactatggtgagttttacgaagaccac
ctcgatgcatcggcgggaatggatatatacggcagtgcatcaacgacgtttgacgcgcaa
ctcgcttggaaagtacaaccacacattcagcttacgctaggcgcgcaaaacttgttcgat
gcactgcctgacgaaaacccgtttcaaggcgaggttggcgcgctttatccacctacatct
ccaggcggcattaacggcgctttttattacgcaggcatcgaatacacctttaattaa
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