KEGG   Alteromonas mediterranea U4: I607_05995
Entry
I607_05995        CDS       T02720                                 
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
amal  Alteromonas mediterranea U4
Pathway
amal02024  Quorum sensing
amal03060  Protein export
amal03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:amal00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    I607_05995
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    I607_05995
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    I607_05995
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:amal02044]
    I607_05995
Enzymes [BR:amal01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     I607_05995
Secretion system [BR:amal02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   I607_05995
  Eukaryotic Sec-SRP protein
   I607_05995
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N Zeta_toxin CbiA cobW AAA_22 AAA_30 Peptidase_C23 KTI12 AAA_33 AAA_16 SLFN-g3_helicase APS_kinase AAA_31 YqeC T2SSE VirC1 AAA_14 nSTAND3 AAA_19 Helicase_RecD ATP_bind_1 TsaE AAA_28 DO-GTPase1 Thymidylate_kin FliD_C AAA_24 AAA
Other DBs
NCBI-ProteinID: AGP85003
LinkDB
Position
1335651..1337087
AA seq 478 aa
MFENLSERLGQTLRNVSGKGRLTEDNIKETLREVRMALLEADVALPVVKAFVAQVKERAV
GTEVTKSLKPGQVFIKIVQSELESVMGEANEKLNLATQPPAVVLMAGLQGAGKTTSVGKL
AKYLTEREKKKVMVVSADVYRPAAIKQLETLADEVKVAFHPSTILQKPIDIVNDAIAEAK
KNFFDVLLVDTAGRLHVDNDMMNEITELHAAVKPIETLFVVDAMTGQDAANTAKAFNDAL
PLTGVILTKADGDARGGAALSVRHITGKPIKFIGMGEKVDALEPFHPERIASRILGMGDV
LSLIEEVERKVDKSKAEKLAKKVQKGKGFDLQDFKDQLEQMKNMGGMMGMLDKLPGMGGM
SDKIKDQANDKQFNQMEAIINSMTPAERARPDIIKGSRKRRIAAGSGTQIQDVNRLLKQF
TQMQKMMKKMSGGGMKKMMRQMKGMVPPGGGFGGPGGPGGPGGFGGGGFGGGGGFPPR
NT seq 1437 nt   +upstreamnt  +downstreamnt
atgtttgagaatttatcagaacgcttaggccaaacattacgaaatgtaagtggtaaaggg
cgtcttactgaagacaatattaaagagacgctacgtgaagtgcgcatggcgctgcttgaa
gccgacgtagcgctgccagtggtcaaagcgtttgttgctcaggtaaaagagcgtgcggtt
ggtacagaagttactaaaagcttaaagccaggccaagtattcataaaaatcgttcagtct
gaactcgagtcggtaatgggggaggcgaatgaaaagcttaacctagccactcagcctcct
gctgtagtgcttatggctggattacaaggtgcgggtaaaaccacctctgtaggtaaactt
gctaagtacctgactgaacgtgagaaaaagaaagtgatggtagtcagtgctgacgtttat
cgtccggccgctatcaagcagcttgaaaccctagctgatgaagtgaaggttgcgtttcac
ccatctactatcttacaaaagcccattgatatcgttaacgatgccatcgctgaagcgaag
aaaaacttctttgatgttctgcttgtagatacagcaggccgtttgcacgtcgataacgac
atgatgaacgaaattacagagttacacgctgcggttaagcccattgagaccctattcgta
gttgatgccatgacaggtcaagatgccgctaatacagcaaaagcgtttaacgacgcgcta
ccactgaccggtgttattcttactaaggccgacggtgacgcccgcggcggtgcggcatta
tctgtacgtcacataacaggtaagcccattaagttcatcggtatgggcgaaaaagtggat
gcgcttgagccattccaccctgagcgtattgcttctcgtatcttggggatgggcgacgta
ctaagccttatcgaagaagttgagcgcaaggtcgacaaatcaaaagccgaaaagctggcg
aaaaaagttcaaaaaggcaagggctttgatcttcaagactttaaagatcagcttgagcaa
atgaagaacatgggcggcatgatgggcatgctagataagctgcctggcatggggggtatg
tctgataagattaaagatcaggcaaacgacaagcagttcaaccaaatggaagccatcatt
aattcaatgacaccagctgagcgcgctcgccctgatattatcaaaggctcgcgcaagcgt
cgtatcgcagcgggttcaggtacgcaaatacaagatgtaaaccgcttgcttaagcagttt
acacaaatgcaaaaaatgatgaaaaaaatgtctggcggcggcatgaagaaaatgatgcgc
cagatgaaaggcatggtgccacccggtggcggtttcggtggaccaggcgggccaggcggc
cctggtggttttggcggaggcggcttcggcggaggcggtggtttccctcctcgctaa

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