Alteromonas mediterranea U4: I607_06195
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Entry
I607_06195 CDS
T02720
Symbol
ruvB
Name
(GenBank) Holliday junction DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
amal
Alteromonas mediterranea U4
Pathway
amal03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
I607_06195 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amal03400
]
I607_06195 (ruvB)
Enzymes [BR:
amal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
I607_06195 (ruvB)
DNA repair and recombination proteins [BR:
amal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
I607_06195 (ruvB)
RecFOR pathway proteins
I607_06195 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_22
AAA_14
Mg_chelatase
AAA_3
AAA_16
AAA_18
nSTAND3
RNA_helicase
Rad17
NTPase_1
TIP49
AAA_17
AAA_2
Bac_DnaA
NB-ARC
AAA_28
Sigma54_activ_2
AAA_24
ABC_tran
NPHP3_N
TsaE
CagL
IstB_IS21
Motif
Other DBs
NCBI-ProteinID:
AGP85041
LinkDB
All DBs
Position
1378906..1379910
Genome browser
AA seq
334 aa
AA seq
DB search
MIEADRLITPEASTEDEVIDRAIRPKMLEDYTGQPHVCEQMEIFIQAARNRDDALDHLLI
FGPPGLGKTTLANIVANEMGVNIKTTSGPVLEKAGDLAALLTNLERNDVLFIDEIHRLSP
VVEEILYPAMEDYQLDIMIGEGPSARSIKLDLPPFTLVGATTRAGSLTSPLRDRFGIVQR
LEFYNVKDLTSIVARSASYLNLDMSEEGAQEVARRSRGTPRIANRLLRRVRDYAEIKSDG
TVVADVAAKALDMLDVDKEGFDYMDRKLLSAIIEKFDGGPVGLDNLAAAIGEEKETIEDV
IEPFLIQQGFLQRTPRGRIVSQRAYLHFGFTPSE
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgattgaagccgacagactgattacgcctgaagccagtaccgaagacgaggtcatcgac
cgcgccattcgccctaaaatgctggaagactatacggggcagcctcacgtatgtgagcaa
atggaaatttttattcaagctgcgcgcaatcgtgacgatgcgctagaccatctacttatt
ttcggtccgccaggactgggtaaaaccacgcttgcgaatattgtggcaaatgaaatgggc
gtgaatattaaaaccacgtcaggccctgtgcttgagaaagctggcgacttggctgcactg
cttaccaaccttgagcgcaacgatgtattgttcatcgatgaaatacatcgcctaagccca
gtggtagaagaaattctctatcctgcaatggaagattatcagcttgatattatgataggc
gaggggccttccgcccgttcaattaagctagacctgcctccttttacgttggtaggcgct
accacacgcgcaggctcgctaacgtcgccattacgcgaccgtttcggtattgttcagcgc
cttgagttttacaacgtaaaagacctcaccagtattgtggcaagaagcgccagctatctt
aatttagacatgagcgaggaaggcgcgcaagaagtggcacgtcgctcgcggggcacgccg
cgtattgccaatcgtttgttacgccgtgttagggactatgccgaaatcaaatctgacggt
actgtggtcgctgacgttgctgctaaagctttagatatgcttgacgtagataaagaaggt
ttcgattacatggaccgcaaattgcttagtgctattatcgagaaattcgatgggggtcca
gtaggcttagataatttagcggcagccattggtgaagaaaaagaaacgattgaagacgtg
atagaacctttccttattcagcaagggtttcttcagcgcacaccgcgcggtcgcatagtg
tctcagcgcgcctatcttcattttggtttcacaccgtctgaatag
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